Salvelinus namaycush (lake trout): 120046967
Help
Entry
120046967 CDS
T07522
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
snh04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120046967
04082 Neuroactive ligand signaling
120046967
04519 Cadherin signaling
120046967
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120046967
Ion channels [BR:
snh04040
]
Ligand-gated channels
GABA-A
120046967
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
SAP130_C
Zip
Motif
Other DBs
NCBI-GeneID:
120046967
NCBI-ProteinID:
XP_038848447
UniProt:
A0A8U0QRX8
LinkDB
All DBs
Position
5:complement(22077069..22089234)
Genome browser
AA seq
561 aa
AA seq
DB search
MVSAKKEMVTAMYPSYISTLFYLFCLTACVKRISGTIKKDERIYPENFTRILDRLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWMDRRLRYEGPIEILRLN
NMMVSNVWTPDTFFRNGKRSVAHNMTAPNRLFRIMKNGTILYTMRLTISAECPMKLVDFP
MDGHACPLKFGSYAYPKTEMIYTWTKGPQYSVEVPQESSSLVQYDLIGHTVSSEEVKSIT
GEYVVMTVHFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAEMERLKRKPAKCPP
APQTTPVKVKDMEEVLQHNPDTNGNADTNGNLRKRMNYMSQQDIQKAESNSEAATGVTRR
QPQSGQSSSSTGSTGDAIILPHSSPGPASQPNTSFTILSVKNTPPAPPTTPTIPANQSQS
TADSSLQDLLGPRLEHIQLMGKNEPKQSPCSQPTTTGMGGTSKIDKYARILFPVSFGAFN
MVYWVVYLSKDTMEAKFRGQI
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggagatggtgactgcgatgtaccccagttatatttcgactctc
ttctaccttttctgcctgactgcttgtgtaaagagaatctctggaacgataaaaaaggat
gagagaatatatcctgagaatttcacacgcattttagaccgactactggacgggtatgac
aacagactgcgacctggatttggtggtccagtgacagaggtgaaaacagacatttatgtg
acaagtttcgggcctgtctctgatgttgaaatggagtacaccatggacgtgttcttcaga
cagacatggatggacaggaggctgaggtatgaggggcctatcgagatcctccgcctcaac
aacatgatggtctccaatgtgtggactccagacaccttcttcaggaatggcaagaggtct
gtggcccacaacatgactgcccccaacaggctattccgcatcatgaagaacggcaccatt
ctttacaccatgaggttgactatcagcgcagagtgtcccatgaagctggttgacttcccc
atggatggacatgcatgccctctcaagtttggaagctatgcataccctaaaacagagatg
atctatacctggaccaaaggaccacagtattcagtggaggttccccaagaatcctccagt
ctagtgcagtatgatctcattggccacactgtcagcagtgaagaggtcaagtcaatcaca
ggtgaatacgtggtgatgacagtgcacttccacttgaagcggaaaatgggctacttcatg
attcagacgtatatcccctgcatcatgacagtaatcctctcccaagtatccttctggata
aataaggaatcagttccggctcgaacagtcttcggcatcaccacagtcttgaccatgacc
acgttaagcatcagtgcgcgccactccctccccaaggtctcctacgccacagccatggac
tggtttattgccgtgtgtttcgcctttgtcttctccgccctcatcgagttcgctgccgtc
aactactttaccaacgcagagatggagagactgaaaaggaagccggcaaaatgcccaccg
gcgccccaaacaaccccagtgaaagtgaaggatatggaggaagttctgcagcataaccct
gacaccaacggtaacgcagacaccaacggtaaccttcgaaaacggatgaactacatgtcc
cagcaagacatccagaaagctgagtccaacagcgaagcagctacaggggtaaccaggaga
caaccccagtctggccaatcgtcttcatccacggggtcgactggggacgccatcatccta
ccacactccagccccggccctgccagccaaccgaacacctccttcaccatcctgtccgtc
aagaacacgcccccggctccacccaccaccccgacaataccagccaatcagagccagtcc
accgctgactcctccctccaggacctcctaggacctagactggagcacattcaactgatg
ggtaaaaatgagcccaagcagtcgccatgctcccagccgaccaccaccggtatgggcggg
accagtaaaatcgacaagtatgctcgcatcctgttcccagtgtccttcggagccttcaac
atggtctactgggtggtttacttgtccaaagacaccatggaggccaaatttcgaggccaa
atctag
DBGET
integrated database retrieval system
