Salvelinus namaycush (lake trout): 120047076
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Entry
120047076 CDS
T07522
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor 1-like
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120047076
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120047076
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
snh01001
]
120047076
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
snh04090
]
120047076
Enzymes [BR:
snh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
120047076
Protein kinases [BR:
snh01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
120047076
CD molecules [BR:
snh04090
]
Proteins
120047076
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
VEGFR1-3_N_Ig-like
I-set
Ig_2
Ig_PDGFR_d4
ig
Ig_VEGFR-1-like_5th
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
120047076
NCBI-ProteinID:
XP_038848553
UniProt:
A0A8U0UDB1
LinkDB
All DBs
Position
5:31186443..31202844
Genome browser
AA seq
986 aa
AA seq
DB search
MELYLTFLLGILPVAAQEWRRPVIKLNSEVVVGPEVVLNPGTPLVLRCEGDGPVNWLTRL
SKHKSLISKDNGRVRTFRVDRPSAEHTGTYKCEYTSVNVKGRDLFSTVHVYVKDPESLFW
TSSTSLRVMRKEGEDHLLPCLLTDPEATDLGLRMDNCTSVPPGMNYTADPRRGILIRNLH
PSYNADYVCSAKLHGVERTSKTFNLNIIQRLRFPPYVFLEKDEYVHIVGEKLSIHCTTHN
PNFNYNVTWNYSSKKRFTIEQKVQSVDSNRLDIESILTIPVVDQSDTGNITCIGTNEAGV
NKSTTSLMVVEKAYIRLSPQLSSKLAHQGLSIDVNEGEDLKLSVLIEAYPQIIGQHWDTP
TASSTQEQAFTRYNNRYSATLLLKRMIAQEQGQYTFYAKSSMANASITFQIQMYQRPVAV
VRWENITTLTCTSFGYPAPIILWYQCSGIQTTCNENATGLQMPAPLLAQTVEVEREEYGA
VEVQSVLTVEPSGHRMTVECVAFNLVGVGKDTFAMEVSNIMFTSTLLGAAGVLAFLLLLL
MVLLYKYKQKPRYEIRWKIIQASEGNNYTFIDPTQMPYNEKWEFPRDKLKLGKILGAGAF
GKVVEATAYGLGEDDNAMRVAVKMLKARAHSDEREALMSELKILSHLGQHKNIVNLLGAC
TQAGPVLVITEYCSHGDLLHFLRHKQETFLNFVMNIPEVPEETSDYKNLCEGKQFIRSDS
GISSVCSDSYLEMRPGPQPVNSSLDSVWEDGGPDSWPLDMEDLLRFSYQVAQGLDFLAAR
NCIHRDVAARNVLLTDRRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCLY
TVQSDVWSYGILLWEIFSLGRSPYPSVLVDTKFYNMIKCGYQMSRPDFAPPEMYTIMKMC
WNLAPTERPTFSKISQLIERLLGEQPERPDQCSTLLSQQQQDMMVEELELCDDNDEPKCC
DSSCDQPCEHEEEEQPLVKTNNYQFC
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtacctgacctttctgctggggatcctgcccgttgcagctcaagaatggcgg
cgtcctgtgatcaagctaaactcagaggtcgtggttgggcctgaagtagtactgaaccct
ggcaccccattggtcttgaggtgtgagggggatgggccagtcaactggctgacccggttg
tccaaacacaagagcttaatttccaaggacaacgggagagtcagaaccttcagggtggac
cgtccctctgcagaacacactgggacatataagtgtgaatataccagtgtgaacgtcaag
ggccgggacttgttctctacggtgcacgtatatgttaaagacccagaaagcctgttttgg
accagcagcacctccctgcgtgtgatgaggaaggagggggaggaccacctgctcccctgc
ctgctgaccgacccagaggccacagacttggggctccgcatggacaactgtacctccgtg
cccccagggatgaactacacagcagacccccgcagaggcattctcatccgcaacctccac
cccagctacaatgctgactatgtctgcagcgccaaactccacggggtggagaggacttcc
aagactttcaacctcaacatcatccaaaggctgcgtttcccaccttatgtattcctggaa
aaggatgagtatgttcatatcgtgggcgagaagctgagcatccactgcaccacacacaac
cccaacttcaactataatgtcacgtggaattacagctccaaaaagagatttacaatagag
cagaaagtccaatcagttgacagtaaccgtctggacattgaaagcatcctgaccatccct
gtagtggaccagtcagacacaggcaacattacctgcatcggcaccaacgaggctggagtc
aacaaatctaccacctccctgatggttgtagagaaggcctacatccgtctttctccccag
ctgtcctccaagctggctcaccagggcctgtccattgacgtgaacgagggggaagacctg
aaactcagtgtcctgatcgaggcataccctcagatcataggccagcactgggacacccct
acagcctcctccacgcaggaacaagcctttacacgctataacaacaggtattccgctacc
ctgctgctcaagaggatgattgcacaggagcagggccagtacaccttctatgccaagagt
tccatggccaacgcatccattacattccaaatccaaatgtatcagaggccggttgccgtg
gtgagatgggagaacatcaccaccctcacgtgcacgtcgttcggttaccctgctcccata
atcctctggtaccagtgctctggaatccaaaccacgtgcaatgagaacgcaacaggtctc
cagatgcctgctcctctcttggcccaaacagtcgaggtcgagagggaggagtatggagca
gtcgaggtccagagcgtcctgacagtggaaccgtccggccataggatgaccgtggagtgt
gtcgccttcaacctggtcggagtcggtaaagacaccttcgccatggaagtttccaatata
atgttcacctccactctgttgggagcagctggtgttctggcctttctcctcctgctactc
atggtcctgctctacaagtacaaacagaaaccgagatatgagatccggtggaagatcatc
caggccagtgaaggaaacaactacacctttatcgacccaactcagatgccgtacaatgag
aagtgggagtttcccagggacaagctcaagctaggaaagatcctaggagccggggccttt
gggaaggtggtggaggccacagcctatggtctaggggaggacgacaacgcgatgcgagtg
gctgtaaagatgctcaaagccagggcccactcggatgagagagaggctttgatgtcagaa
ctgaagattctgagtcacctgggacagcacaagaacattgtcaacctcctgggagcctgc
actcaggcgggacctgtactggtgatcactgagtactgtagtcatggcgaccttctgcac
ttcctgcgacacaagcaggagaccttcctgaactttgtcatgaacataccagaggtacca
gaagagaccagtgactacaagaacctctgtgaggggaaacagttcatcagaagtgatagt
gggatatccagtgtgtgttctgacagctacctggaaatgaggcctggtccccagcctgtc
aactcttctctggactctgtgtgggaggatggtgggccggactcgtggccgttggacatg
gaggacctgctgagattctcctaccaggtggctcagggcctggacttccttgcagccagg
aactgtattcaccgggacgttgcagcccggaacgttctcctgacagaccgccgtgtggct
aagatctgtgacttcggcctggcacgtgacatcatgaatgactccaactatgtggtgaag
ggcaatgcgcgtctgccagtgaagtggatggctccagagagtatctttgactgtctctac
actgtccagagtgacgtctggtcctatgggatcctgctatgggagatcttctctctcgga
aggagcccctatcccagtgtcctggtggatactaaattctacaacatgataaagtgtggt
tatcagatgtctcgaccagacttcgcacctccagagatgtatacaatcatgaaaatgtgc
tggaatctagcgccaacagagcgaccgaccttcagcaagatcagccagctgattgagaga
ttactgggtgagcagccagaacgtccagaccagtgttctactctcctgtcccagcagcag
caggacatgatggttgaggagttggagctgtgtgatgataatgatgagcctaagtgttgt
gacagctcctgtgaccagccgtgtgagcacgaagaggaggagcaaccactggtgaagacc
aataactatcagttctgctga
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