Salvelinus namaycush (lake trout): 120047117
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Entry
120047117 CDS
T07522
Name
(RefSeq) sal-like protein 3
KO
K19871
sal-like protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120047117
03036 Chromosome and associated proteins [BR:
snh03036
]
120047117
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120047117
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120047117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_15
zf-C2HC_2
zf-C2H2_11
HTH_23
LRR_At1g61320_AtMIF1
IZUMO
UBZ_FAAP20
TDBD
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
120047117
NCBI-ProteinID:
XP_038848583
UniProt:
A0A8U0UDC5
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All DBs
Position
Sna5:complement(41741149..41764382)
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AA seq
1386 aa
AA seq
DB search
MDQRKQRRDLSEEIRKKIDKHGKGKTYKTISKQLDVPVTTVAIIIKKFKAHETVANLPGH
CRKRNIKPQIEQKESANATGEVLDDSDSGNESRSGSEETHVCEKCCAEFFKWSDFCEHLT
SCIKNPLVLIVNENETEPSREYPAEPSPSPSCHSDQADSEDAGEGSSHSPGEDDEGAEIA
LEGGSALDKEDEPMELSPEKPVDLEVSDASPEPDGALPQFSDPAPSSVKSYSMPSTNVTL
ETLHSTSVAVAQFSQSVCAAVAGSGVSPLAIPMILDQLMALQQQQIHQLQLIEQIRSQVA
LMQRQPSVAQLSQNHHRHHNTVAGSQGPSSSNQLQQLHNFITPPVHQLPIRLPSPLNSLG
SSSSSLTSAIDGPLFSHTQQSSNQQSHFSMPNTTSANSSFPPSSGNVLSSLLPSCITSIT
HSSSGAGSAAGGGMSSSITALPRNSSSPPSLGHNSLLSTSPSNLPLIPHSSSSSVIFPNP
LASIAATANALDPLSALMRHRKGKPPNVSVFDTKPSSEDPFFKHKCRFCAKVFGSDSALQ
IHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHVQMNPYPVPEYLDNVPTSSG
IPYGMSFPPEKPVTTWLDSKPVLPTVPTSTGLQFPPTLPSMMGGYGDSPSLTPLSRSPQR
PSPPSSECASLSPNLFTEAGMITTSQSPQPNLGGDMPPILKPEGIHLPPNLPTSRPGENK
TNTVTQVVLATTVTATTSSCTEPIIAPSSVSHPILPMISDQFKAKFPFGGLLDSMQTSET
SKLQQLVENIDKKMTDPNQCVICHRVLSCQSALKMHYRIHTGERPFKCKVCGRAFTTKGN
LKTHFGVHRSKPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNTPLPESLQDMDTD
LSFDEKSLDAMSNYDDELLDEMEAAMEDEAELKEGEEMIDPSKPLHPYSGMSPGRSPPTS
VISSIAALENQMKMIDSSVNMSRSFGLKPMQNGGGFGGENDFFNNDSLYASGDLEGQSVG
SPALSESSGSMQPISPAHSHPESHRSKSPATLNHNSSTAADEGQENNRMATVKSEKSDSP
APVSEGNGALDLTASITQPSRHFIKEENHFNMMFLSRDRGLSNSSLLNTASNMIKMEMNG
HRHSKPMSLNDGPYMPVGIQVPASAPQTNMSLSITPMLAPPTPRRTPKQHNCHNCGKNFS
SASALQIHERTHTGEKPFGCSICGRAFTTKGNLKVHMGTHMWNNAPARRGRRLSVENPMA
LLGGDAMKFSEMFQKDLAARAMNVDPGFWNQYAAAITNGLAMKNNEISVIQNGGIPQLPV
SLGGGGMTSLGAMSGGMDRMDRMDRMDRVNASSSPPMTGLDKTVLEVGARRPFARFMEEN
KEIGIN
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggaccagagaaagcaaaggagagatttgtctgaggagatcagaaagaaaatagacaag
catggtaaaggtaaaacctacaagaccatctccaagcagcttgatgttcctgtgacaaca
gttgcaatcattattaagaagtttaaggcccatgaaactgtagccaacctccctgggcat
tgccgcaagaggaacatcaaaccccagattgaacagaaggagagtgcgaatgccacagga
gaagtgctggatgactcagacagtgggaatgagagccgtagtgggagcgaggagacccac
gtgtgtgagaagtgttgcgccgagttcttcaagtggtccgatttctgcgaacacttgacg
agctgcatcaagaaccccctggtgctcatagtaaatgaaaacgaaacggaaccctcccgg
gagtatcctgcagagccatcgccctcgccaagctgccatagtgaccaggcagacagtgag
gacgctggagagggcagcagccacagccccggtgaggacgatgagggcgcagagatagcc
ctggaggggggcagtgccctggacaaggaggacgagcccatggagctgtctcctgagaaa
ccggtggacctcgaagtgagtgacgcctccccagagccagatggtgctctacctcagttt
agcgatcctgccccatcctctgtgaagagctacagcatgccgagcaccaacgtcactctg
gagacactacacagcaccagtgtggcagtggctcagttctcccagagtgtttgtgccgcg
gtggccggcagcggggtctcccccttggccatccccatgatcctggaccagctgatggcg
ctgcagcagcaacagatccaccaactccaactgatcgaacagatccgcagtcaggtggcg
ttgatgcaaaggcagccctctgtcgcccagctgtcccagaaccaccaccgccaccacaac
acagttgctggctcccaggggccgtcatcctccaaccaactccagcagttacacaacttc
atcactccccctgtccaccagctgcccatcaggttgccctcaccgctaaacagtctgggc
tcctcctcctcctcactcacctctgctatagatgggcccctcttctcccatacccagcaa
agtagtaatcagcagtcacatttttcaatgcccaacaccacttcagcaaactcctctttc
ccaccatccagtggtaatgtgctgtcatctctactgccttcctgcattacttcaatcaca
cacagcagcagcggagctggatccgctgctggaggaggcatgagcagcagcattacagct
ctgccaaggaattccagcagccccccttcactaggccacaacagcctcctgagcactagt
ccctccaatctaccactgatacctcacagttcatctagtagtgtcatcttcccaaacccg
ctagccagtatagctgccactgccaacgcacttgacccactctccgctctgatgaggcac
cgcaagggaaagccccccaacgtgtccgtcttcgacaccaagcccagctccgaggacccc
ttcttcaagcataagtgtaggttctgtgccaaggtgtttggcagtgacagtgccctgcag
atccacctgcgctctcacaccggcgaacggcccttcaagtgcaacatctgcggaaaccgg
ttctccaccaagggcaatctgaaggtccacttccagaggcacaaggaaaagtacccgcat
gtccagatgaacccttatcccgtgccagaatacctggataacgtaccgaccagctcaggc
attccgtatggtatgtccttccccccagagaagccggtgaccacctggctggacagcaaa
cctgttctccccacagtccccacctcaaccgggctccagttccccccaacactccccagc
atgatgggaggctacggtgattctccgagcctcactccccttagcagatcaccccagagg
ccctccccaccctccagcgaatgtgcctctctgtcaccgaacctcttcacagaagcaggc
atgatcaccacctcacagtctccgcagcccaacttagggggtgacatgcctcccattctg
aaaccagagggcatccacctacccccaaacctccccacttccaggcctggtgagaacaag
accaacaccgttactcaagtggtcctcgccaccacggtcaccgcaaccactagcagctgt
actgaacccatcattgccccctcctctgtctcccatccaatcctccccatgatctctgat
cagttcaaggccaagtttccgttcggcggccttctggactctatgcaaacgtctgagacc
tcaaagctgcagcagctggtggagaacatcgacaagaagatgaccgaccccaaccagtgt
gtcatctgtcaccgtgtgctcagctgccagagcgcccttaagatgcactaccgcattcac
acgggagaaaggcctttcaaatgtaaggtctgcggccgagcattcaccaccaagggcaat
ctgaaaacgcactttggggtccatcgttccaagccccctcttcgggtccaacactcctgc
cccatctgccagaagaagttcacgaacgctgtggtcctgcagcagcacatccgcatgcac
atggggggccagatccccaacaccccgctgcctgagtctctccaggatatggacaccgac
ctctcctttgacgagaagagcttagatgccatgagcaactatgatgacgagctactggat
gagatggaggcagctatggaggacgaagcagagctgaaagaaggagaagagatgattgac
ccatccaaacctctccatccatattcaggaatgtcccctggtcgctccccacctacctct
gtcatctccagtatcgctgctctggagaaccagatgaagatgatcgactcctctgtcaat
atgagccgctcgtttgggctgaagcccatgcagaacggtggcgggtttggaggggagaac
gacttcttcaacaatgactcgctgtatgcctcgggggacctggaaggccagagtgtggga
agcccagcactatctgagtcctcagggtccatgcagcccatctcccctgctcacagtcac
cctgagagtcatcgatccaagtccccagccacactcaaccataacagcagcactgcagca
gatgaggggcaggagaacaacaggatggctacagtgaaatctgagaagtcagattcccca
gcacctgtgtctgaaggtaatggggcattggacctgactgctagcataacccagcctagc
aggcacttcatcaaggaggagaaccacttcaacatgatgttcctgagcagagatagaggt
ctgagcaactctagcttgctaaacacagcatccaacatgatcaaaatggagatgaatggg
cacaggcacagcaagcccatgtcactgaatgacggtccttacatgcccgtgggcatccaa
gtgcccgcttctgcaccccagaccaacatgagcctcagtatcacccccatgctggcaccg
ccaactccccgtcgcacccccaagcagcacaactgccacaactgtgggaagaacttctcc
tcagctagtgccctgcagatccatgagcgcacacacacaggagaaaaaccatttggctgc
tcgatctgtggaagggccttcaccactaaaggcaacctgaaggtgcacatgggcacccac
atgtggaacaatgcgccagcccgtcgtggacgccgtctctccgtggagaaccccatggcc
ttgctgggcggggacgccatgaagtttagcgagatgtttcagaaggacctggcggcgagg
gccatgaacgtagaccctggcttctggaaccagtatgctgccgccatcaccaacggcctg
gccatgaagaacaacgagatctccgtcatccagaatggaggcatcccccagttgcccgtc
agcctgggtggaggaggtatgacctcgctaggggccatgtcaggaggtatggaccgcatg
gaccgtatggaccgtatggaccgggtgaatgccagtagcagccctcccatgactgggctg
gataagacagttctggaggttggggctagacgcccattcgctcgatttatggaggaaaat
aaagagattgggatcaattaa
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