Salvelinus namaycush (lake trout): 120047125
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Entry
120047125 CDS
T07522
Name
(RefSeq) calsyntenin-3-like
KO
K22661
calsyntenin 3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120047125
Cell adhesion molecules [BR:
snh04515
]
Cadherins
Cadherin related
120047125
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Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
120047125
NCBI-ProteinID:
XP_038848590
UniProt:
A0A8U0QS95
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Position
Sna5:complement(43157577..43189302)
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AA seq
955 aa
AA seq
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MSSLSFLLLCLTSVANGNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPLHYA
GEICGFRVHSGPTGSSSVQFEAVVLDRSTGEGLIRSKEPLDCESQREHSFTIQAYDCGEG
PDGANSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDRIVRVEALDADCSPQY
SQICFYDIITPNVPFVIDNDGNIKNTEPLDSKRQRVHTFWVTAFDCGKNRAQADAQVVVT
VKPSCKPGWIGWSKRVEYTPGSGSIPLFPSLHLETCEETVWNIQATVELQTGHIGKGCDR
DSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTSALPTLPSSDSSLVFSFNGSTHVAVVPD
SVAAAVSGDHFTLQLWMRRGGINTQPPTNQARGTHREEETIVCSTVKNDDSFSHYSLSVH
GCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTFDPALIHD
NGAIPNPAPRQRLVIGACWGNDWLNQRQAETASPIEIPNPTWKYVGGYRGLLSGVTVRPG
SVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAVQQVTY
RNSLRFATPGVRPLKLTTSLRCFNEESCLTLRQLEGYLVVLQPDAPQISLSGVGPHLARP
APEFEGPRGVPLFPELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPLGEELN
PEREELLVDMDALRERGLEIINTTAYIAITGAESISVYEDVLRSVRYRLAKGSARFERRF
RLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSHHSGELSGHTLPNP
HRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRGEGARGGSKEDSGQWDDSALTI
IVNPMESYESRMGISADTEGEGEEDEEVVESPDDANDDQRIIIKKEGRDGNPRRY
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgagttctctctcattcctcctcctttgcttgacttcggttgccaatggcaacaaagcc
aataagcacaagccatggatcgagacggagtaccagggtatcgtcatggagaacgacaac
accgttctcctcaacccaccactgtttgccctggataaagacgctccactgcactatgca
ggtgagatctgtggcttccgggtgcacagtgggcccacgggatccagttcggtacagttt
gaggcggtggttctggaccgctcgacaggggagggcctgatccgctctaaagagcccctg
gactgtgagagccagcgggagcacagcttcaccatccaggcctatgactgtggagagggc
cccgatggagccaacagcaagaagtcccacaaggccacggtgcatgtacgtgtgaatgac
gtaaacgagttctccccagtgttcgtggagcgtcgctatgaggcctccgtccccgaaggc
cgtctgttcgaccgcatcgtgcgcgttgaggccctcgacgcagactgctccccgcagtac
agccagatctgcttctacgacatcatcacccccaacgttccctttgtcatcgataacgat
ggtaacattaagaacacagagccattggattcgaagcgccagcgtgtccacaccttctgg
gtgaccgcgtttgactgtggcaagaaccgcgctcaggccgacgcccaggtcgtcgtcacg
gtcaaaccgtcctgcaaacccggctggatcggttggtcgaagcgggtggagtataccccc
gggtcaggcagcattcccctgttccccagtttgcacctggagacctgcgaagagactgtg
tggaacatccaggccaccgtagagctgcagactggccatattgggaagggctgtgacagg
gacagctactcagaccgatcagtgcgcagactctgtggtgctgtgagaggtgaagtggac
ttactcccgcccccgtccccagcagccaattggacctcagccttgcccaccctcccttct
tctgattcgtccctggtgttctccttcaatggctccacccatgttgctgtggtacccgac
tccgttgccgcggccgtatccggagaccatttcacactccagctgtggatgcgaaggggt
gggatcaacacgcagcctccgactaatcaggccagaggaacccacagggaggaggagacg
atcgtctgcagtaccgtcaagaatgacgactccttctcccactactctctctccgttcac
ggttgccgtctttctcttttctactggcccgatgtctccgctgcgcggcccgtgaaattc
ctctggaaactggagcaggtgtgtgacagcgagtggcatcacctgtccctcagtgtccag
ttcccctctgtgacactgtacgtggatggagtcaccttcgaccccgccctcatccacgac
aacggagccatacccaaccctgccccacgacagcgactggtcattggcgcctgctggggt
aacgattggttaaaccaaagacaggctgaaactgcttctccaatagaaatccccaatccc
acttggaagtatgtgggtggttaccgtggcctgttgtcaggggtgacggtgcgtccaggg
agtgtggagccccacagtgtggtggagtgtctgtatgcctgcagggaggggctggacttt
ggggacctggagaccttgggctcaggcatgaaggtgcatgtgaaccccagtcagtctgtg
ctggttctggagggtgatgacattgagagcttcaacagggccgtgcaacaggtcacctac
aggaactctctccgcttcgccacccctggagtcaggccactcaaactgaccacctccctc
aggtgtttcaatgaggagagttgtcttacgctcaggcagttggagggctacctggtggtc
cttcagcctgacgcccctcagatctccctgtctggggtcggcccccacctggcccgcccc
gcgcctgaattcgagggcccccgtggtgtacccctcttcccagagctgaggattgtgtgc
tccctgtctcatgctgttaacacagccgctcagggcatggaaggaggagctctgatgtca
gatgccgtggcccacactctggacggctgtgaggtccagcccctgggggaggagctaaac
ccagagagggaggagctcctggtggacatggatgccctgagagagaggggtttggagata
atcaacaccactgcttacatcgccatcacaggagcggagtccatctccgtgtatgaggat
gtccttcggtctgtccgttaccggctggctaaaggctcggcccgctttgagaggcggttc
cgtctgtcctgctccgagatgaatggcagatacaccagcaacgagctcacactggaggtg
aacttcctgcactccctggacagtctgtaccacccgtctcacctcctggcctcccagcag
cagttccttcacccgtctcatcactctggggagctgagcggacacaccctgcctaacccc
caccgcaactcagtggtgccaggagcagccacagtcatcatcatggtgtgcgtgggcttc
ctggttgtcatggtgatcctgggagtgtttcgaatccgctccatccaccgtcgtggcgag
ggcgccaggggagggtctaaggaggacagcggccaatgggatgactctgccctcaccatc
attgtcaaccccatggagtcctatgagtctcgtatgggcatctcagctgacactgaaggt
gagggggaggaggacgaggaagtggtggagtcgcctgatgacgccaacgacgaccagcga
atcatcatcaagaaagagggcagagacggcaacccccgtcgctactaa
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