Salvelinus namaycush (lake trout): 120047127
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Entry
120047127 CDS
T07522
Name
(RefSeq) glutamate receptor ionotropic, kainate 3-like
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120047127
04082 Neuroactive ligand signaling
120047127
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120047127
Ion channels [BR:
snh04040
]
Ligand-gated channels
Glutamate (ionotropic)
120047127
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Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
120047127
NCBI-ProteinID:
XP_038848593
UniProt:
A0A8U0QRE6
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Position
Sna5:43967312..44082943
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AA seq
919 aa
AA seq
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MRNTWLSARSSILEYWTSAILCLFWIQYSCGMPHVIRIGGIFEQTEGPVPLVSPEELAFK
FAVNNINRNRTLLPNTTLTYDIQRINIYDSFEASRKACDQLSLGVVAIFGPSHSSSSNAV
QSICNALEVPHIQVRWKHHPMDNRDTFYANLYPDYSSLSYGILDLVQFLKWKTATVVYDD
STGLIRLQELIMAPSRYNIRLKIRQLPFDGEDPRPLLKEMKRGREFRIIFDCSHEMAAQI
LKQAQTMGMMTEYYHYIFTTLDLMAIDLEPYRFCGVNMTGFRILNVDNPQVASIVEKWSQ
ERQIPPKPDSGLLEGIMTTDAALTYDAVHIVSVSYQHAPQMTVNSLQCHRHKPWRFGGRF
MNFIKESHWEGLTGRLSFNRTSGLRTDFDLDIISLKEEGLEKVGKWSASGGLNITEVPKR
KGMNITDSLANRSLVITTILEEPYVMLKKSDKALVGNDRFEGFCIDLLKELASILGFTYE
IRLVPDGKYGSQDDKGQWNGMIKELMEHRADLAVAPLTITYLREKVVDFSKPFMSMGISI
LYRKPNTTNNGFFSFLNPMTPDIWVYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSD
VVENNFTLLNSFWFGVGSLMQQGSELMPKALSTRIIGGIWWFFTLIVISSYTANLAAFLT
VERMESPVDSADDIAKQTKIEYGVVKDSATMSFFKKSKVSTFEKMWAFMSSKQSTSLVKS
IEDGIQRVLKSDYALLMESTTIDYITQRNCNLTQVGGVIDSKGYGIGTPMGSPYRDKVTI
AILSILEDGRLHMLKEKWWSGSSCLDEERREKAGPMGIQNLGGIFIVLASGLVLSVFVAI
AEFIYKLRKTAKREQRSFCSAMVDEIRQSFTCGRRVKHKHRHQVPVKTDAVINMHTFNDR
RLPGKDNMSCTTGMTPVFP
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacacttggttgtctgcccggagttcgattttggaatactggacatcggccatt
ctatgtctcttttggattcagtactcttgtgggatgcctcatgtcattcgaatagggggg
atttttgagcaaacagagggaccagtgccgctcgtcagcccagaggagcttgcctttaaa
tttgcggtgaacaacatcaacagaaacaggactttattgcccaacacgacgttaacgtac
gacatacagaggattaatatctacgacagttttgaagcgtcgagaaaagcctgtgaccaa
ctgtctttaggtgtagtggcaatatttgggccctcacatagctcgtcctcaaacgccgtc
cagtccatctgcaatgcgttggaagtgccacacatccaggtgcgatggaaacatcaccct
atggacaacagggacacattttacgccaacctgtacccggattactcttctctcagctac
ggcatcttggatttggtgcagttcctcaagtggaaaacagccacagtcgtatacgatgac
agtacaggtcttattagactacaggaactgataatggccccctccaggtataacatcagg
ctaaagattcgccagctcccttttgacggtgaggaccccaggcctctcctcaaggagatg
aagagaggacgggagtttcgcattatcttcgactgcagccacgaaatggctgcacagatc
cttaaacaggcccagacgatgggaatgatgacagagtactaccactacatcttcaccact
ctggacctcatggctatcgacctggagccctaccgtttctgtggcgtcaacatgaccggc
ttccgcatcctcaacgtggacaaccctcaggtggcgtccatcgttgagaagtggtcccaa
gagaggcagatacctcccaagcccgactcgggtctcctggaggggatcatgacgacagat
gctgctctgacgtacgacgcggtccacatcgtgtccgtctcctaccagcacgcaccacag
atgacggtcaactcgctgcagtgccaccgccataaaccatggaggttcggcggacgcttt
atgaacttcatcaaagagtctcactgggaaggcctgacggggaggctgtcgttcaacagg
accagtggcctccgcacagactttgacctggacatcatcagcctgaaagaggagggcctg
gagaaggtggggaagtggagtgcgtccggaggtctcaatatcaccgaggtgcccaagcgg
aaagggatgaacatcacagactcactggccaaccgttccctggtcatcaccaccatcctg
gaggagccatatgtcatgcttaaaaagtctgacaaggcgctggttggcaacgaccgtttc
gagggattctgtatcgacctgctcaaggagctggccagcatcctgggcttcacctacgag
atccgcctggtgcctgatgggaagtacggatcgcaggacgacaagggccagtggaacggc
atgatcaaggagctgatggaacacagagccgacttggctgtggcccctcttaccattacc
tacctgcgtgagaaggtcgtggacttctccaagcccttcatgagcatgggcatcagcatc
ctgtatcgcaagcccaacaccaccaacaacggcttcttctccttcctcaaccccatgacc
cctgacatctgggtctatatcctgctggcctacctaggcgtcagctgtgtcctcttcgtc
atcgctaggttcagtccatacgaatggtacgacgcccatccctgcaatcccggatccgat
gtggtggagaacaacttcaccctccttaacagcttctggttcggtgtgggctccctcatg
cagcaaggctctgagctgatgcccaaagccctgtccaccaggatcatcggaggcatctgg
tggttcttcaccctcatcgtcatctcctcctacacggccaacctggccgccttcctcacc
gtggagcgcatggagtcgcccgtggactctgccgacgacatcgccaagcagaccaagatt
gagtatggtgtggtcaaagacagtgccaccatgtctttcttcaagaaatcaaaggtgtct
acttttgagaagatgtgggcttttatgagtagtaaacagagtacgtcgctggtcaagtcc
attgaggacggcatccagagggttctgaagtctgactatgccttgctcatggagtccacc
acaattgattacattacccagcggaactgcaacctcacccaggttggaggcgtcattgac
agcaaaggctatggaataggcactcccatgggctctccataccgggacaaagtgaccatc
gccatcctgagcattctggaggatggccgtctgcacatgctcaaggagaagtggtggagc
ggcagcagctgtctggacgaagagcgccgtgagaaagccggccccatgggcattcagaac
ctgggagggatctttatagtgctggcgtctggcctggttctctccgtctttgtggctata
gctgaattcatatacaagctaaggaagacggcgaaacgtgagcagaggtctttctgcagt
gccatggtggacgagatcagacagtcgttcacctgcgggaggcgtgtgaaacacaagcac
cgccaccaggtcccggtcaagacggatgcagtgatcaacatgcacacgttcaacgaccga
cgactcccgggaaaggacaacatgagctgcaccactgggatgacccccgtgttcccgtga
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