Salvelinus namaycush (lake trout): 120047164
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Entry
120047164 CDS
T07522
Name
(RefSeq) nestin-like
KO
K07609
nestin
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120047164
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type VI
120047164
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Gene cluster
GFIT
Motif
Pfam:
Filament
Motif
Other DBs
NCBI-GeneID:
120047164
NCBI-ProteinID:
XP_038848623
UniProt:
A0A8U0QRG3
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Position
Sna5:49928192..49939557
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AA seq
1321 aa
AA seq
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MELHRLRHHHSHRTDDKLQMLNLNQRLETYLGRVRLLEEENKLLCQEIQALRGSGQGGRM
GLEDKLSLARQEVEEAWREKDQVELELGSLGEELQVLGLQRQWEADAHGEVKKKLADSRK
QMEEERRAQIWLREKVSQLEKQIQFQIQTHQEDVAGFQATLIHVRPALPPPPPQTGTQLP
SLQELGEEYSQMAVRAWHEAAMVFQGQVDSLDESLNQARTRLAQVGQEKIESQLKLQALE
NELQSAQDRRQCLERSVAKQRDRQRQEIQNLQAHLDVLEMEKGALGNQIDTLLTESRGLL
QLKMSLGMEVATYRALLDNESLKGDFSSTNQLRSTYISGREKLNISDNDKEDHDEANYCQ
NNSVSWRAELEGDSYAQDNTLADTHPLIRYKSDETDVNTQASHMGESDSSDGEEDREVCQ
TGTDTCGEGKSKQFDTMEYLYEESEGDVIDQESNMGSTHQEDTDASQTKEHATQENDEEN
AVDQLIQEAEEEQSYEELTEPGEYSMVCSDEDYNEERIDRLVEQELENLSISSYSEHFTG
QMIESESVLSLQIESHTELAQTQDILYSEEVEQIHSERLNQSEQEHIPSGGEKLNLYVQE
HIPSDGEKLNQSEQENIPSGGEKLNQSEAEDITSGGETLDICEQEHIPSDREKMYQFEPE
HVPSNGEKLNQSEQENIPLGGERINQSEQQYIISSEEKLNQSEQENIPSGGEKLNQSEQE
NIPSGGEKLNQSETEDITSGGETLDICEQENIPSDGEKLNQSEQENIPSDGEKMNQSEQE
NIPSDGEKMNQSEQENIPSGGEKLNQSETEDITSGGETLDICEQEHIPSDREKMNQSEPK
YIPSGGEKLNQSEQENIPLGGEKLNQSEPEYITSGGEKLNLYAQEHIPSDGEKMNPSESE
YTPLGGEKLNQSKPEYITSGGEKPNQSKQENIPLGGEKLNQSKQENIPLGGEKLNQSEPE
YIPSGGEKLNQSEQENIPSGGEKLNQSEQENIHSGGEKLNQSEQECISSEVMYSVHSRIL
LTSEHTSLRESSGEISKEEYLAQGKVFSGGLGTEAVSDKIEGQDDQNLSMLTHVDFTESH
SIYSSLNSRPESQTNMNNLDIEESNSTDDESPNASQYLQPVTKANLTADQEDLLDAAVSH
YKDCNPLIEHSAEEVTSYQASNECLQTDEWEVLESPNKHLESGDPFAGHKRESERSSKTD
SEGRDLHSFLSSGVHNNFWGSNLETGTPYQLDEPYDHVTELPNQNLALANNLTWVDLENP
QATNWNTKMDSDTPKASTLEEEDKQMPSQVKQLVCRDVVEGVNVTSEGSEDEGDSWSSGE
E
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atggagctccaccgcctccgacaccaccacagccaccggaccgacgacaagctccagatg
ctgaacctcaaccaacgcctggagacctacctgggccgagtgaggctgctggaggaggag
aacaagctactatgccaggagatccaggccctgaggggcagcggccagggggggcggatg
ggcctggaggacaagctgagcctggccaggcaagaggtagaggaagcctggagggagaag
gatcaggtggagctggagctagggagcctgggtgaagagctccaagtcctggggctgcag
agacagtgggaggcggacgcccatggggaggtaaagaagaagctggcagacagcaggaag
cagatggaggaggagaggagggctcagatctggttaagagagaaggtgagccagctagag
aaacaaatccagttccagatacaaacccaccaggaagatgttgccggcttccaggcaaca
ctaatccatgtcagacctgcactgccaccccctccaccccaaacgggaacccagctgccc
agcctccaggagctgggtgaggagtactcccagatggctgtcagggcgtggcatgaggca
gccatggtgtttcagggccaggtggacagcctggacgagtctctaaaccaggccagaacc
cggttggctcaggtgggccaggagaagattgagagccagctgaaacttcaggccctggag
aacgagctgcaatcagcccaggatagaaggcagtgtctggagaggagtgtggccaaacaa
agagacaggcagaggcaagagatacaaaacctgcaggcccatctggacgtgttggagatg
gagaagggggcgctgggaaatcagattgacactctcctgacagaaagtaggggtctgctg
cagctgaagatgtctctaggcatggaggtggccacatacagagctttactggacaatgaa
agtctgaagggggatttctcttcaacaaatcagctaaggagtacctacatctctggcaga
gagaaactgaatatatccgacaatgacaaagaggatcacgatgaggcaaactactgtcaa
aataattctgtttcatggagggctgagctagaaggcgacagctatgctcaggacaacaca
ctagccgacacacaccccctgatccgttacaagagtgacgagacggatgtcaacactcag
gcttcacacatgggcgaaagtgactccagtgatggtgaagaggacagggaggtttgccag
acaggaacagacacctgtggcgaaggcaagtccaaacagtttgacaccatggagtatctg
tatgaagagtcagaaggagacgtcatagatcaggaaagtaacatgggctccactcaccaa
gaggacacggatgctagccaaacaaaggagcatgctacacaggagaacgatgaggagaat
gctgtagatcagttaattcaggaggcagaagaggagcaatcttatgaggaacttacagaa
cctggagagtactccatggtgtgctctgatgaggactataatgaagaaagaattgataga
ttggtggagcaagagctagagaatttatctatatccagttacagtgaacactttactggg
cagatgattgagagcgagtcagtactgagtctccaaattgagtctcacactgaacttgcc
cagacacaagacatattatacagtgaggaggtagagcagatacactcagagagactgaat
caatctgagcaagagcatataccctcaggcggagagaaactgaatctatatgtgcaagaa
cacattccatcagacggagagaaactgaatcaatctgaacaagagaatataccttcagga
ggagagaaactgaatcagtccgaggcagaggatataacttcaggcggagagacactggat
atatgtgagcaagaacatataccctcagacagagaaaaaatgtatcaattcgagccagag
catgtaccttcaaacggagagaaactgaatcaatctgagcaagaaaatatacctttaggt
ggagagagaattaatcaatctgaacaacagtatatcatttcaagcgaagagaaactgaat
cagtctgagcaagagaatataccttcaggcggagagaaactgaatcaatctgagcaagag
aatataccctcaggcggagagaaactgaatcaatccgagacagaggatataacttcaggc
ggagagacactggatatatgtgagcaagagaatataccctcagacggagagaaactgaat
caatctgagcaagagaatataccctcagacggagagaaaatgaatcaatctgagcaagag
aatataccctcagacggagagaaaatgaatcaatctgagcaagagaatataccctcaggc
ggagagaaactgaatcaatccgagacagaggatataacttcaggcggagagacactggat
atatgtgagcaagaacatataccctcagacagagagaaaatgaatcaatcagagccaaag
tatataccttcaggcggagagaaactgaatcaatccgagcaagagaatatacctttaggc
ggagagaaactgaatcaatccgagccagagtacataacttcaggcggagagaaactgaat
ctatatgcgcaagaacacataccctcagacggagagaaaatgaatccatccgagtccgag
tatacacctttaggcggagagaaactgaatcaatccaagccagagtacataacttcaggc
ggagagaaaccgaatcaatccaagcaagagaatatacctttaggcggagagaaactgaat
caatccaagcaagagaatatacctttaggcggagagaaactgaatcaatccgagccagag
tatataccttcaggcggagagaaactgaatcagtctgagcaagagaatataccttcaggc
ggagagaaactgaatcagtctgagcaagagaatatacattcaggcggagagaaactgaat
cagtctgagcaagagtgtatttcctcagaggttatgtattcggtgcactctaggattcta
ttgacatctgaacacacatctcttagagaaagttcaggagaaatatccaaagaagaatat
ttggctcaaggtaaggtattcagtgggggactgggaactgaagctgtatcagacaaaata
gaaggacaggatgaccagaacctttctatgctgactcatgtagacttcactgaaagccat
tctatctacagcagtttaaacagcaggcctgagagtcaaaccaacatgaacaacttggat
atagaagagtccaacagcacagatgatgagtctccaaatgcaagccagtatttgcaacct
gtcaccaaagcaaatctaactgcagatcaggaagacttgttagatgcggcggtctctcac
tataaggattgcaatcctcttattgaacattctgcagaggaggtcactagctatcaggca
agtaatgaatgtcttcagacagatgaatgggaagtcttagaaagtccaaacaaacaccta
gaatctggagatccttttgcaggtcacaagagagaatccgagagatcatccaaaactgac
agcgaaggccgggacctccacagcttcctcagctctggtgtacacaacaacttctggggt
tccaatctggagacaggaaccccctatcaactggatgagccatatgaccatgtgaccgag
ctacccaatcagaacctagccttggctaacaacctaacctgggtggatttggagaatcca
caggcaactaattggaacacaaagatggacagtgacacacctaaagcttccacccttgaa
gaagaggacaaacagatgccctcacaggtgaagcagctggtttgtagagatgtggtagag
ggtgtgaatgttacttctgaaggttctgaagatgagggagactcctggtcatctggggaa
gaatag
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