Salvelinus namaycush (lake trout): 120047265
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Entry
120047265 CDS
T07522
Name
(RefSeq) neuronal pentraxin-1
KO
K25709
neuronal pentraxin
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
120047265
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Motif
Pfam:
Pentaxin
Laminin_G_3
Laminin_G_2
SlyX
Striatin
GemA
RRN3
DUF4175
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
120047265
NCBI-ProteinID:
XP_038848720
UniProt:
A0A8U0UDI6
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Position
Sna5:complement(64698647..64712792)
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AA seq
579 aa
AA seq
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MGHKCISKPSPLQTLILSTILLFISPTSAMPGPDYGGHPRFICIPVPADTDPACFPSGGP
VMGPSGAGHHAPPVGPPNNNGWWGMTEEAKTTILHLRESLVQQKETILDMRETIRELTAK
LTLCEGSGPGIGAHNDHHEPPSHHGGAVSHLPYADNGHHGNQQGHHGNNNHALDAAEHYP
GNGGHRLDSGHNNRGKDKHSTPEDMISSKSPEELGRMLQALKERMDNLQQSRNTSTTYSS
SLKELLQRKISALEQQMHHTAAALSSSPNHHDDSDHHDDGHHEDHDDDGHHDDSHHDNHH
DNDGHHDDSHHDDHPDDHHDDGQHDNEADSHGYLQRTGFRIPGPKAGLHSNNKLDSLLNN
LHHTGTNSRKKTKTPDAFQIGFPMRTNYMYGKVKTTLLHEIFALTLCLWIKGGAGPGLGT
PFSYSVPGQANELVLIEWGNNPMELLVDDKAVTLPLSISDGKWHHVCVTWSTRDGEWEAY
QDGVKRGSGENLSAWHPIKPGGVFILGQEQDTLGGRFDATQAFMGDISDLQMWANVLTAH
DIYSLASCNSHLSGDVITWSENVVELHGGVTKYPFDPCH
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgggacacaagtgcatctctaaaccctcgccgttacaaacactcatcctctccaccatc
ctcctcttcatctcccctacctctgccatgccagggcctgactatggaggccacccgcgg
ttcatctgcattcccgtccctgccgataccgaccctgcctgcttcccctctggggggcca
gtcatggggcctagcggggcagggcaccacgcgcctcctgtagggcccccgaacaataat
ggctggtggggaatgacagaggaggctaaaaccactattttacacctgagagagagcctg
gtgcagcagaaagagaccatcctggatatgagagagaccatcagggagctgaccgccaag
ctcaccctgtgtgagggctctgggccgggcatcggggctcacaacgaccaccatgaacct
ccatctcatcacggaggggctgtcagccatctgccttacgctgacaacggtcaccatggc
aaccagcagggtcaccatggaaacaacaaccatgccttggatgcagccgaacactaccct
gggaatggggggcaccggttggacagtgggcataacaacagggggaaggataaacactca
acaccagaggatatgatatcatcaaaatcgccggaggaactgggcaggatgctgcaggcc
cttaaagagagaatggataacctgcagcagtcacggaacacctccaccacctactccagc
tctctgaaggagctcctccagaggaagatcagtgctctggagcagcagatgcaccacacc
gctgctgccctcagcagcagccccaatcaccatgacgacagcgatcaccacgatgacggg
caccatgaagaccacgacgatgacgggcatcacgatgacagtcaccatgacaatcaccat
gacaatgacgggcatcacgacgacagtcaccatgacgaccaccccgatgatcaccatgat
gatgggcaacacgacaacgaggcagatagccatggttacctgcagagaacgggttttcgc
ataccagggcccaaggctggcctgcactccaacaacaaactggactctctactgaataac
ctgcaccatacaggtaccaacagcaggaagaagaccaagacccctgatgccttccagatc
ggcttcccaatgagaaccaactacatgtacgggaaggtgaagacgaccctcctccacgag
atctttgccctcaccctgtgtctgtggataaaggggggtgcaggccccgggctggggacc
cccttctcctactctgtaccaggacaggccaacgaactggtgctgatcgagtggggcaac
aaccccatggagctgctggtggatgacaaggcagtgactctgcccctttctatcagcgat
gggaagtggcaccatgtgtgcgtgacgtggtcgacgagggacggtgagtgggaggcgtac
caggacggggtgaagaggggctctggggagaacctgtccgcatggcatcccatcaaacct
ggaggggtcttcatcctcggacaggaacaggacactctgggaggtcgtttcgacgccacg
caggcgtttatgggggacatctctgacctccagatgtgggctaatgtcctcacggcccat
gacatctacagcctggcctcctgcaacagccacctcagcggggacgtgatcacctggtcc
gagaacgtggtggagctccacggaggggtcaccaagtacccctttgacccctgtcactaa
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