Salvelinus namaycush (lake trout): 120047323
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Entry
120047323 CDS
T07522
Name
(RefSeq) ATP-dependent translocase ABCB1-like
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120047323
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snh02000
]
120047323
Transporters [BR:
snh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120047323
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
RsgA_GTPase
Rad17
AAA_5
AAA_21
AAA_29
AAA_7
AAA_28
AAA_25
Zeta_toxin
PRIMA1
DUF5862
Motif
Other DBs
NCBI-GeneID:
120047323
NCBI-ProteinID:
XP_038848775
UniProt:
A0A8U0QT24
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All DBs
Position
Sna5:complement(70094020..70115805)
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AA seq
1299 aa
AA seq
DB search
MTEGQPTVDTERKPKKGLGRKKKEPAKAVGFFQLFRYATGYEVLLMIIGLLCAALHGIAL
PLMCVVFGQMTDSFVQSGQQLNLTGHIPPPPPPPPRCLLLKNILCDTYICISRHAYYFIG
IGCAVFLLGTFQVMLFLLTATKQTKRIREKYFHAILHQQMSWFDTHQIGVLNVRLTDDIN
TINEGLGDKICVFVQFFCTFLSGFIIGFIFGWKLTLVILAVSPLLAGSAAVWSKILATLT
SKELSAYAKAGAVAEEILVAIRTVVAFNGQKKAVERYENNLEDAKNFGIKKAITTNVAMG
FTQFVIFGTYALAFWYGTKLSVDEPENYTIGKTITVFFSVMIGSFSLGQGAPNLEAIAKA
RGAAYEVYNTIDQPRPIDSSSKEGHKPDCVKGDIEFKNIHFSYPSRKDVKILQGVNLTVP
RGKTIALVGASGCGKSTTIQLLQRFYDPDSGEITLDGRDIRTLNVKWLRENMGIVSQEPV
LFGTTIAENIRYGREDATDEDIERAVREANAYDFISKLPDKLNTMVGERGAQLSGGQKQR
IAIARALVKNPKILLLDEATSALDTQSESVVQAALDKARAGRTTIVIAHRLSTIRTADVI
AGFCNGEVVEQGTHRELMDKKGVYYSLVMQQSQGKLEEDEEDPVEEDNPPKYEDLDDVLY
DSSDMDELEVVNEEGIENGGFERNSISSGRVEMKPTRRKSKKSKKDKKEKKPEEAPDIPF
TRILALNKPEWPYMLVGTLSSLVGGAVYPCVAIIFAKIIGVFSEVDPEVKRQKTMMFSLL
FLLIGGVAFVTYFLKGYMFGKSGELLTMRLRRQVFHAMMRQEIGWFDDNNNAVGVLTTRL
ATDASLVKGATGSRLGLATNTVCALTIAIVVAFIHSWQLTLLILACVPFLIGANIIQMRA
MAGHASKDQGALEQSGKISTETVENFKTVVGLTREDVFFHKFMDSLERPYQNGLVKAPIY
GLTFAVAQAIPYMVNAAIFRFGSWLIAHCHTEYENVFLVFSVIIFAAMNIGESASFAPDF
AKAKAAAGRILGLLEKKPEIDIYSEEGEKPTDFVGDIEFRGIHFAYPTRQNVRVLQGLSV
SVGPGQTLALVGESGCGKSTSIQLLERFYSPAEGQVLVDGLDTKTLNLSWLRSQLGLVSQ
EPILFDCSISENIQYGDNSREVSQDEIEEAAKNANIHDFIMGLPEKYNTRVGDKGTQMSG
GQKQRIAIARALVRQPKVLLLDEATSALDTESEKIVQQALDAARQGRTCIVIAHRLSTIQ
NADQIAVIQYGQVTEQGTHTDLMAKGGAYYALVNAQVTH
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggggcagccaaccgttgacacggagcgcaagccaaagaagggcctcggaagg
aagaaaaaagaaccagcaaaagcagtgggatttttccagttgttccgctacgctactggt
tatgaggtgctcctaatgataatcggcctgctatgtgctgctctccacgggatagccctg
ccccttatgtgtgttgtgtttggacagatgaccgacagctttgtacaaagtggacagcag
ctcaaccttacaggccatataccaccccccccccccccccccccccgttgcttattgctt
aaaaatatactgtgtgatacatacatttgcatttccagacatgcctattacttcatcggg
atcggttgtgctgtgttcctgctggggacctttcaggtgatgttgttcttgctgacagcc
accaaacagaccaaacggatccgagagaaatacttccatgccatcctccaccaacagatg
tcctggtttgatacacaccagataggagttctcaacgtcaggttgacagatgacatcaac
acaatcaacgaaggccttggagacaagatctgtgtgttcgtgcagttcttctgcaccttc
ttgtcagggttcatcattggtttcatcttcggctggaagctgacactcgtcatcctggcc
gtcagtcctctcctggcaggatcagctgccgtctggtccaaaatacttgccaccctgacc
agtaaggagctgtctgcctatgccaaagcaggggcggtagctgaagagatactggtggct
atcaggacagttgtggctttcaatgggcagaagaaagctgtggaaaggtatgaaaacaac
ttggaggatgctaaaaactttggaataaagaaggccatcaccactaacgtggccatgggc
ttcacccagtttgtcatatttgggacgtacgccttggctttctggtacgggaccaagctc
tctgtagacgagcctgaaaactacaccattggaaaaaccattacagtcttcttctcagtg
atgattgggtcgttctctttgggccagggtgcgcctaacttggaagccatcgccaaagcc
cggggtgctgcctatgaagtctacaataccattgaccagccgcggcccatagacagcagt
tcaaaggaaggtcacaaaccagactgtgtgaaaggagacattgaattcaagaacatccac
ttcagctacccctccaggaaagatgtcaaaattcttcagggagtgaatctgacagttcct
cgtgggaagaccatagctctggttggagccagtggatgtgggaagagcaccaccattcag
ctgctgcagcgcttttatgatccagactcaggagagattaccctggatggtcgggacatc
cggaccctgaatgtgaagtggctgagggagaatatgggtatcgtcagtcaggaacctgtg
ctattcggaacaaccatcgcagaaaacatccgctacggcagagaggatgccacagatgag
gacatcgaacgggccgtgagagaggccaacgcatatgacttcatctccaaactccccgat
aagctgaacaccatggtgggggagcggggagcccagctcagtggaggacagaagcagagg
atagctatcgcccgggccctggtcaaaaacccgaagatcctcctgctggacgaggccacc
tccgccctggacacccagagtgagtcggtcgtccaggccgctctggataaggccagggcg
ggccgcaccacgatagtgatcgcccaccgcctgtccaccatcagaacagctgacgtgatc
gctggcttctgcaacggagaggtggtggagcagggaacacacagggaactcatggacaag
aagggggtctactactctctggtcatgcagcagagtcaagggaagctagaggaagatgaa
gaggaccctgtggaagaggataaccctcctaaatatgaggatctagatgatgtcctatat
gactcatctgacatggatgagctggaagtggtaaacgaggaaggaatagaaaacggcggc
tttgaaaggaactcaatcagcagtggccgtgtggaaatgaaaccgaccaggaggaaatct
aagaagtccaagaaagacaagaaggaaaagaaaccagaggaagctccagacatccccttc
accagaatcctggccttgaacaagcccgagtggccgtacatgttggtaggaaccctgtct
agcttggtggggggagccgtttatccctgtgtcgccatcatcttcgccaagatcattgga
gtgttttccgaggttgacccggaagtcaaacgacagaaaaccatgatgttttccctgctc
ttccttctcatcggaggagtggcttttgtcacctacttcctaaagggttacatgtttgga
aaatcaggagagcttcttaccatgaggctgaggaggcaggtattccatgccatgatgaga
caggagattggatggtttgatgacaacaacaatgcagtgggagttctaaccaccagattg
gccacagatgcatctctggttaaaggggcgactgggtctaggttgggtctggccaccaac
acagtctgtgctctcaccatcgccattgtggtggccttcatccacagctggcagctcacc
ctcctcatcctcgcctgtgtgcccttcctcattggagccaacatcattcagatgagggcc
atggcaggccacgcctccaaagaccagggtgccctggagcagtctgggaagatatctact
gagaccgttgaaaacttcaagacagtagttggattgacacgggaggacgtcttctttcac
aagttcatggacagtctagaaagaccataccagaacggtttggtgaaggctcccatctac
ggactaacatttgccgttgcccaagcaatcccttacatggtcaatgctgcaatcttccgc
tttgggtcctggcttattgctcactgtcacacagaatatgaaaatgttttccttgtgttt
tctgtgatcatatttgctgccatgaacataggagaatcagcatcttttgctcctgacttt
gccaaagcgaaagcagctgctgggagaattcttggcttgttggagaagaaaccagagatt
gacatttacagtgaggagggagagaagccaacggactttgtcggggacattgagttccga
gggatccactttgcgtacccgacccgtcagaacgtgagggttctccaggggttgagcgtg
tcagtggggcctggtcagaccctggccctggtcggggagagtggctgtgggaaaagcacc
tccatacaactactggagcgtttctatagccctgctgaaggacaagtgttagtggatggg
ttggatactaagaccctgaacctgtcgtggctgaggtctcagctgggcctggtgtcccag
gagcccatcctgttcgactgcagcatctcagagaacatccagtacggggacaacagcaga
gaggtctcccaggatgagatagaggaggcagccaagaacgccaacatccatgacttcatc
atgggcctgccagagaaatacaataccagggttggggacaaggggacccagatgtctgga
ggtcagaaacagaggatagccattgccagagcactggtcaggcagcctaaagtactgctg
ctggatgaagccacttccgccctggacacagagagtgagaagattgtccaacaggcttta
gacgccgcccggcagggccgcacctgcatcgtgatcgcccaccgcctgtctaccatccag
aacgcagaccagatagcggtaattcagtatggtcaggtgacagagcagggtacacatact
gacctcatggctaaagggggggcttactatgccctggtcaacgcacaggtcacccactaa
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