Salvelinus namaycush (lake trout): 120047364
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Entry
120047364 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04120
Ubiquitin mediated proteolysis
snh04144
Endocytosis
snh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120047364
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120047364
09144 Cellular community - eukaryotes
04530 Tight junction
120047364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120047364
04121 Ubiquitin system [BR:
snh04121
]
120047364
03029 Mitochondrial biogenesis [BR:
snh03029
]
120047364
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120047364
Membrane trafficking [BR:
snh04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
120047364
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
HECT type E3
120047364
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
120047364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Reovirus_L2_N
Motif
Other DBs
NCBI-GeneID:
120047364
NCBI-ProteinID:
XP_038848818
UniProt:
A0A8U0QRT5
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All DBs
Position
Sna1:64954745..65012076
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AA seq
905 aa
AA seq
DB search
MSMAALPEVRGLQTDENEARILRVKVIAGIGLAKKDILGASDPYTRVSLYDPVNGELTSL
QTKTIKKTLDPKWNEELFFRVHPRKHRLLLEVFDENRLTRDDFLGQVDVPLHQIPTENPN
IERPYTFKDFLLHPRSHKSRVKGHLRLKMTYLPKNNSEDAAEQTEDMDPSWEFLEGQDMS
GPRHNHLLPAMPPGWEERQDNLGRTYYVNHETRTTQWHRPIVQDSQVEAEQRQNIHMEAQ
HAFTARRQISDQEDSNDRQQESTESWEIITEDESTLYNSQRSPPPPHSPLEFHSFCDELS
RLQASGATSGNRRTSLQLQGPSSHSSHSSRRGSAQTLTVEEHPVHPVLLATSAGLPPGWE
EKQDSKSRPYYVNHNSRITTWTRPLIQITSDAAAQAVLSQNATVYQPPMLSPEGSPQHSP
SSQRECGFMPAGWEVRNAPNGKPFFIDHNTKTTSWEDPRLKIPVHMRRRPSLDPTDLGPM
PPGWEERVHSDGRIFYIDHNTKNTQWDDPRLQNSAITGPAVPYSRDYKQKYEYFRKKLKK
PADIPNRFEMKLRRNTVLEDSYRRILSIKRADFLKARLWVEFEGEKGLDYGGVAREWFFL
ISKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAF
FIRPFYKMMLQKHITLQDMESVDSEYFNSLKWILENDPIDLDLRFTIDEELFGQTHQHEL
KPGGSEIVVTDDNKKEYIHLVMQWRFVNRILKQMTAFKEGFYELIPQDLIKIFDENELEL
LMCGLGDVDVNDWRENTKYKNGYCPNQPVILWFWKTVLLMDAEKRIRLLQFVTGTSRVPM
NGFAELYGSNGPQLFTIEQWGTRDKLPRAHTCFNRLDLPPYESFEELREKLHIAIENAQG
FDGVD
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggcggcacttcccgaggtccgcggacttcagaccgatgagaatgaggctaga
attctgagagtgaaagtcatagctggaattggtttggccaagaaagatatccttggagcc
agtgatccgtatacaagagtgtccctttatgaccctgtcaatggagaactaacaagtctt
cagactaaaacaattaaaaagacattggacccgaagtggaatgaggaattatttttcagg
gttcatcccaggaagcatcggctgttgctggaggtgtttgatgagaatcgtctgacacgt
gatgactttctggggcaggtggatgtaccattacaccagataccgacagaaaatcctaac
attgaaaggccatacacattcaaggattttctacttcacccgagaagtcacaaatccagg
gtcaaaggtcatctccgtctgaagatgacctacctacccaaaaacaactcagaggatgct
gcagaacagactgaagacatggatcctagctgggagtttttagagggccaggacatgtcc
ggtcccaggcacaaccacctgttgcctgcaatgccccctggctgggaggagaggcaggac
aacctgggcaggacctactatgtcaaccacgaaaccaggaccacacagtggcacaggccc
atagtacaagacagccaggtagaggcagagcagaggcaaaacatccacatggaggcacag
catgccttcaccgcccgcaggcagatctccgaccaagaggactccaacgacagacaacaa
gagtcaacggagagttgggaaatcataacagaggatgagtccaccttgtacaacagccag
cgctccccccctccaccccactcccccctggagtttcactccttctgtgatgagctcagt
cgcctccaggcctcgggtgccacatccggcaaccgacgtacctccctccagctgcagggc
ccttccagtcattcaagtcactccagtcgcagaggcagtgcccagacactgacagttgag
gagcaccctgttcatcctgtgttgttagcaacctcagcggggctgcctccaggctgggag
gagaagcaggatagtaagagcagaccctactacgttaatcacaacagcaggataaccact
tggacacggccactcatccagataacctcagacgcagcagcccaggctgttctgtcccag
aacgccactgtgtaccagccccccatgctctctcctgagggctccccccagcattccccc
agctcacagagggagtgtggcttcatgccggcgggctgggaggtccgcaatgcccccaac
ggaaaacccttcttcatcgaccacaacactaagaccacttcctgggaagaccccaggttg
aagattcctgtgcacatgaggaggagaccttcgctagacccaactgacctcgggccaatg
ccgcctggctgggaggagagggtccacagtgatgggaggatattctacatagatcacaac
acgaagaacacacaatgggatgaccccagattgcagaattcagccataactggaccagct
gtgccttactccagagactataaacagaagtatgaatacttccggaagaagctgaagaaa
ccggctgacatccccaaccgctttgagatgaagctcaggcggaacaccgtgctagaggac
tcctacagacgaatcctgtcaatcaagagggccgacttcctgaaggcgcggctgtgggtg
gagtttgagggagagaagggcttggattatgggggcgtggccagggagtggttcttccta
atctccaaggagatgttcaacccctattatgggctgtttgagtattctgccacggacaac
tacactctgcagatcaaccccaactcaggcctctgcaatgaggaccacctgtcctacttt
aagttcattggccgtgtggcaggcatggctgtctaccatggaaagctgctggacgccttc
ttcatcaggcctttctacaagatgatgttgcagaagcacattactctacaggacatggag
tctgtggacagtgagtacttcaactccctgaagtggatattggagaatgacccgatagac
ctggatctgagattcaccatagacgaagagctctttggacagacccaccagcatgagctg
aagccaggaggatctgaaatagtagtcaccgatgacaacaagaaggaatacatccatctt
gtcatgcagtggaggttcgtgaacaggatactgaagcagatgaccgcattcaaggaggga
ttctatgagttgataccccaggatctcatcaagatctttgacgagaatgagctggagctc
ctgatgtgtggcctgggagacgtggatgtgaacgactggagggagaacaccaagtacaag
aatggctactgtcccaaccagcctgtcatcctgtggttctggaagactgttctgctgatg
gatgcagagaagcgtatccgcctgttgcagtttgtgactggcacctcccgggtcccaatg
aatggctttgcagagctctacgggtctaacggaccacagctgtttaccattgagcagtgg
ggaacacgagacaaactacctagagcccacacatgcttcaaccggctggacctgcctccc
tatgagtcgtttgaggagctgagggagaagctacacatcgccatagagaatgcacaaggc
tttgatggagtggattag
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