Salvelinus namaycush (lake trout): 120047376
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Entry
120047376 CDS
T07522
Symbol
gria1a
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor 1a
KO
K05197
glutamate receptor 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120047376 (gria1a)
04082 Neuroactive ligand signaling
120047376 (gria1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120047376 (gria1a)
Ion channels [BR:
snh04040
]
Ligand-gated channels
Glutamate (ionotropic)
120047376 (gria1a)
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Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
GRP
Motif
Other DBs
NCBI-GeneID:
120047376
NCBI-ProteinID:
XP_038848826
UniProt:
A0A8U0QUF3
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Position
Sna5:8489520..8630811
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AA seq
932 aa
AA seq
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MQRSFTLLYTSFLGMCLGSSFPSNINIGGLFPTESHEYEVFRFALSHHQDIPKLVPQVDM
VKMGNSFSMTYAFCSQFSKGVYAIIGLYDRKTVNMLMSFCGALHVCFVTPSFPXETANQL
VIQLRPELQDTLVGVIDHYGWTKFVYMYSSDSGLSVLQKVLDTAAERSWLVTSVNVETMT
EASFLKVFQDLDKRKEGQIIIDCETERLTSILKKIVEQGKNAKSYHYILANLGFLDIDLT
DLRKGGANITGFQLVNYTEQNVSRTIQQWMEFENKDAKFPKRRLKYTGALTYDGVKVMST
AFQNLRKQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVRIHGLTGHIQFNEKGRRT
NFTVSVMELAPSGPKKVGYWNEDEKYVSTATFMRGSNDSSYGLQNRTYIVTTILESPYVM
LKKNHDQLSGNDKYEGYIVELAAEIAKHVGYHYKLKVVTDGKYGARDSETKMWNGMVGEL
VYGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWM
CIVFAYIGVSVVLFLVSRFSPYEWHAEDYEEGADPQTPTQPTGPGAGLQSGQSPGQQGQN
QQNQEQTNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLA
AFLTVERMVSPIESAEDLAKQTEIAYGTLDAGSTKEFFRRSKIAVFEKMWSYMKSADPSV
FVKTTDEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSP
LRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIG
GLGLAMLVALVEFCYKSRTESQRMKQNINDAMHCSTRMSGNGNGNGNGGGGGIGGAGGGE
NGRILTHDFPKTVQTLPCMSHNASMGLSASGM
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaagcttcaccctcctgtacaccagttttctggggatgtgcttgggttcaagt
tttccaagtaacatcaatatagggggactattcccaaccgaatctcacgaatatgaggtg
tttcggttcgcgctctcgcaccaccaggatatccccaaactggtgccgcaggtggatatg
gtcaagatgggcaacagcttctccatgacatatgccttctgttcccagttctctaaaggt
gtctatgccatcattggcctctacgacaggaagacggtcaacatgctgatgtcgttttgc
ggggcgctgcacgtgtgtttcgtcacgccttccttcccantcgagacggccaaccagttg
gtgatccagctgagacccgagctacaggacactctggtgggggtcatagaccactacgga
tggaccaagttcgtctacatgtacagctcagattctggcctgtcggtgctgcagaaggtc
ctggacacagctgctgagaggagctggctggtgacgtctgtcaacgtggagaccatgacg
gaggcctcattcctcaaggtgttccaagacctggacaagaggaaggagggacagatcatc
atcgactgtgagaccgaaagactcacctccatcctaaaaaagatcgttgaacaagggaag
aatgctaagagttaccactacatcctggccaacctgggttttctggacattgatctaaca
gacctgaggaaaggcggggccaacatcacaggcttccagctggtcaactacacagagcag
aacgtcagccgtaccattcagcagtggatggagttcgaaaacaaagacgccaagttcccc
aagagacgcctgaagtacaccggagcgttgacatatgatggggtgaaggtgatgtctaca
gcgttccagaaccttcggaaacagaggatagacatctctcgccgtggcaacgcaggcgaa
tgcctcgccaacccgccggcaccctggggccaaggcatagatatacagagagccctgcaa
caggtgcgtatccatggcctgacaggtcacatccagttcaatgaaaaaggacgcaggacc
aacttcaccgtcagtgtcatggagctagccccgtctggacctaagaaggtgggctactgg
aacgaggacgagaagtacgtgagcacagccaccttcatgagaggaagcaacgacagcagc
tatggcctacagaacaggacctacatagttaccaccatcctggaatccccatacgtgatg
ctgaagaagaaccatgatcagctgtcagggaacgataagtacgagggttacatcgtggag
ctagcggctgagatcgccaagcacgttggataccactacaaactgaaggtggtcacagat
gggaagtatggagccagagactccgagaccaagatgtggaacggcatggttggagagctg
gtgtacgggaaagcagacgtggcggtagccccgctgaccatcaccctggtccgagaagag
gtgatcgacttctccaagcccttcatgtctctgggcatctccatcatgatcaagaagccc
accaagtctaaaccaggtgtcttctccttcctggacccgctggcctatgagatctggatg
tgtatcgtgttcgcctacatcggtgtgagcgtggtcctgttcctggtgagccgcttcagc
ccctatgagtggcacgcagaggactatgaggagggggccgacccccagacccctacccag
ccgacggggcccggtgctgggctacagtcggggcagagccctggtcagcaaggccagaac
cagcagaatcaggaacagaccaacgagtttggcatcttcaactctctctggttctccctg
ggagccttcatgcagcagggatgtgacatctcacccaggtctctgtcagggcggatagtg
ggtggcgtgtggtggttcttcactctcatcatcatctcgtcctacacggccaacctagct
gcttttctcacagtggagaggatggtgtcccccatagagagtgctgaggacctggctaaa
cagactgagatcgcctacggaaccctggatgctggctccaccaaagagttcttcaggcgg
tctaagatcgcggtgtttgagaagatgtggtcgtacatgaagtcggccgacccctcagta
ttcgtgaagaccacagacgagggagtgatgagggtcaggaagtccaaagggaagtatgcc
tacctgttagagtcgaccatgaacgagtacatcgagcagaggaaaccctgtgacaccatg
aaggtcggggggaacctggactctaaaggatatggtatcgccacgcccaagggctcaccc
ctcagaaaccctgttaacctggccgtgttaaaactgaacgagcaaggcctgttggacaaa
ctgaaaaacaaatggtggtacgacaagggcgagtgtggcagcgggggcggggactccaag
gataagacgagtgcgttgagcctgagcaacgtggccggagtgttctacattctgattgga
ggactgggcctggccatgctggtggcgttggtggagttctgctacaagtcacgaaccgag
tctcagagaatgaagcagaacatcaacgatgccatgcactgctccaccagaatgagtggg
aacgggaacgggaacgggaacgggggaggaggaggaataggaggagcaggaggaggagag
aacggacgcatcctaactcacgacttccctaaaacagtccagactctcccctgcatgagc
cacaacgccagcatggggctcagcgcctccggcatgtaa
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