Salvelinus namaycush (lake trout): 120047495
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Entry
120047495 CDS
T07522
Name
(RefSeq) homeobox protein CDX-1-like
KO
K09312
homeobox protein CDX1/4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120047495
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
120047495
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Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
MS_C
Motif
Other DBs
NCBI-GeneID:
120047495
NCBI-ProteinID:
XP_038848957
UniProt:
A0A8U0QSX2
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Position
Sna5:complement(31129850..31133400)
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AA seq
254 aa
AA seq
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MYVSYLMDKNTGMFSNSAGHPTQPLNSQNFMQYTDFTGYHHVTGVSDPHAQTTGVWNPAY
LAGPREQWSPYGQSADFHGLSPGTEQINFSSPDLTSILPTGPGTLPSLNSPAGQYSPDSE
RRNSYDWIRHNVHSSSTGGKTRTKDKYRVVYTDEQRLELEKEFQYSRYITIRRKTELALG
LSLSERQVKIWFQNRRAKERKMTKKKIQQSQQASKTTTTLTFTPSCLADPSNGSMATSSS
LLSEKISMTIKEEY
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagttacctgatggataaaaacaccggaatgttctcaaattccgcgggacac
ccgactcaacctctgaacagtcagaacttcatgcagtatacggatttcaccggttatcat
cacgtcacaggcgtcagtgacccgcatgcccagacgacaggtgtgtggaaccctgcttac
ttagcaggtccgcgggagcagtggtcaccgtatggccagagcgcggacttccacggtttg
agcccaggtacagaacagatcaatttcagttccccggatctgacatccatcctgcctacg
gggccgggaactcttccttcactcaactcacctgccgggcagtactctccagactcagag
agaagaaactcatacgactggatcagacacaatgtacattcatccagtacaggagggaag
acgcggaccaaggacaagtacagggtggtgtacacagacgagcagcgcctagagctagag
aaggagttccagtacagccgctacatcaccatcaggaggaagacggagctggccctgggc
ctcagcctctcagagagacaggtaaagatctggttccagaacaggagggccaaggagagg
aaaatgaccaagaagaagatccagcagtcccagcaggcctctaagactacaactaccctg
acctttactccatcctgcctggctgaccccagcaacggctccatggcaaccagctccagc
ttgttgtcagagaaaatatcaatgactatcaaagaggagtactga
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