Salvelinus namaycush (lake trout): 120047519
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Entry
120047519 CDS
T07522
Name
(RefSeq) rho family-interacting cell polarization regulator 1-like isoform X1
KO
K24818
Rho family-interacting cell polarization regulator
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120047519
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120047519
Cilium and associated proteins [BR:
snh03037
]
Other cilia and associated proteins
Stereociliary proteins
120047519
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
120047519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PL48
Motif
Other DBs
NCBI-GeneID:
120047519
NCBI-ProteinID:
XP_038848976
UniProt:
A0A8U0QUQ6
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All DBs
Position
Sna1:complement(65214987..65229331)
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AA seq
722 aa
AA seq
DB search
MFTGSTKNPTPKIPQPERLDEVYSALRRGLQSFLQVHQLELGSLGQQIRESKRNGRLGSL
YELDKQVKAIERFMRRLEFHLSKVEELYDAYCMQRRLRDGASKMVAAFNSATGSKEARES
LNEANRGYREYTEHMCSLESELENQMGEFHIKMKGLIGYARLCAGDQYEVLMRYGRQRWR
MKGRVEVSSKQVWDSEDNVFLPLITELLSIKVTELKSLANHVVVGSVSCETLDLFCPLPQ
TVAVDINDLGTVKLNLEVNWSPFDKDDQTSSSSTVSKRFLSNQSPPDTPSMREQVFYSLL
RRPGELENGTVWSNSSESSDDSSSPAMGHTHRMMATHSLQTTPTIQISFNPRQSSVSTPS
LLSNQEEGEPDATKGFGKTDSVKCTLLNGHLKCSQSLTHISERAIDCASTNRLSDQSVES
SETPETLPRLDLEVSCVASHCSNQDMHEALDLPGSGGPESCVSTPVDHCDAPPASTLQAE
KPMAGVEPLPTDRVLGEGLREEKSSAEHNHRLQSTQPQALTLPEETVTGQSHIRSFSFTQ
EVETALESFDFLNYSDLDDEEEDEKEQAEEEEAEQKRDEKEKEQEKEDETRDSAERSAFP
SIMYQALTELILPSSVWKVECSDECEDDVIEIIVEAPEGFRNEDCPLDADCSSEEEERSE
QLQASSETEEEEEKEKEKVEDKKEEEQVTEMDIPATQEHGDEASCVEEPRSSTHSSIATT
VL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaggttctaccaagaacccaacccctaaaatacctcagcctgagaggctggac
gaggtgtactccgcactgaggagaggcctacagtcattcctgcaggtccaccagctggag
ctgggcagcctggggcagcagatcagagagagcaagagaaatggccgtctggggtctctg
tatgagttggataagcaagtgaaggctatagagagatttatgcgtcgcttggagttccac
ctcagcaaggtagaggagctgtacgatgcttactgtatgcagcggcggctgcgggatggg
gccagcaagatggtggcagcctttaactctgccacagggagcaaggaggcacgggagagc
ctgaatgaggccaacaggggctacagggagtacactgagcacatgtgttcgctggagagt
gaactggagaaccagatgggagagtttcacatcaagatgaaaggtctgattggctatgca
cggttgtgtgcaggagaccaatatgaggtcctgatgcgttacgggcgtcagcgctggagg
atgaaaggtcgtgtggaggtcagcagtaaacaggtgtgggacagtgaggacaacgtcttc
ctgcctctcatcacagagctcctgtcaatcaaggtgactgagctgaagagcttggccaat
cacgtggtggttggcagcgtgtcttgtgagacactagacctgttctgtccactgcctcag
acggttgctgtggatatcaacgacttggggacagtaaaactgaacctagaggtcaactgg
agtccgtttgataaagatgaccagacctcgtcctccagtacggtttccaagcgctttttg
tccaatcagagccctccagacacaccttccatgcgcgagcaggtgttttattctctattg
aggagaccaggggagctggagaatggtacagtctggtcaaactcctctgaatcatcagac
gactcttccagcccagccatgggacacacacacaggatgatggccactcacagcctgcag
accacacccactatccagatctccttcaacccccgccaatcaagcgtctctaccccatcc
ctcttgtccaatcaggaggaaggggagccagacgccaccaagggatttggcaaaacagac
tctgtgaagtgtacactgctgaatggccatttgaagtgttctcaatctctcacccatatc
agtgagagagccatagactgtgcttcgactaacaggttgtctgaccaatcagttgagtcc
tctgaaacgccagaaaccctaccccgcttagaccttgaagtctcctgtgtggcttctcac
tgctctaaccaggacatgcatgaagccttggacttgcctggatctgggggcccagagtca
tgtgtttcaaccccagtggatcactgtgatgctcctccagcctcaacactgcaggccgag
aagcctatggctggagttgagcctcttcccacagaccgtgtactgggagagggactgagg
gaggaaaagtcctccgcggaacacaatcacagactccaatcaacccagccacaagcgcta
acactaccagaagagacagtgactggtcaatctcacattcggtccttcagcttcactcag
gaagttgagactgccctggagagctttgattttctcaactactctgaccttgacgatgaa
gaagaggacgagaaagaacaagcagaagaggaagaagctgaacagaagagggatgagaag
gagaaggaacaagagaaggaagacgagacaagggactctgctgagaggtcagcattccct
tctattatgtatcaggctctaactgaactcatcctgccatctagtgtttggaaagtggaa
tgcagtgatgagtgtgaggacgatgttatagaaatcattgtcgaggcccctgaaggcttc
cggaatgaggactgtcctctagatgcagactgcagctctgaggaggaggagagaagcgag
cagctgcaggcctccagtgagacagaggaagaggaagaaaaagagaaggagaaagtggaa
gacaagaaggaggaggagcaggttacagagatggacatccctgccacacaggagcatggt
gatgaggcatcctgtgttgaggaaccccgctcctcaacccacagcagtatagccaccact
gtcctttaa
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