Salvelinus namaycush (lake trout): 120047527
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Entry
120047527 CDS
T07522
Name
(RefSeq) transforming growth factor beta-2 proprotein-like
KO
K13376
transforming growth factor beta-2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04060
Cytokine-cytokine receptor interaction
snh04068
FoxO signaling pathway
snh04110
Cell cycle
snh04218
Cellular senescence
snh04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120047527
04350 TGF-beta signaling pathway
120047527
04068 FoxO signaling pathway
120047527
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120047527
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120047527
04218 Cellular senescence
120047527
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
snh04052
]
120047527
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120047527
Cytokines and neuropeptides [BR:
snh04052
]
Cytokines
Transforming growth factors (RSTK binding)
120047527
Glycosaminoglycan binding proteins [BR:
snh00536
]
Heparan sulfate / Heparin
Growth factors/receptors
120047527
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Beta-prop_RIG_2nd
CBM96
Motif
Other DBs
NCBI-GeneID:
120047527
NCBI-ProteinID:
XP_038848981
UniProt:
A0A8U0QR06
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Position
Sna5:39085398..39108301
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AA seq
411 aa
AA seq
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MNYCVLSLLLTLDLATVAVSLSTCSTLDMDQFMKKRIEAIRGQILSKLKLTSPPETYPKP
EEVSRDIIAIYNSTRDLLQEKANERAATCERQRSEEEYYAKEVHKIDMQPLYPSENVISP
MHYNPYYRRLTFDVTSMEKNASNLVKAELRVFRLQNTNARVSEQRIELYQILSHKDLASP
TQRYIDSKVVRTRMEGEWLSFDVTEAVSEWLLHRDRNSGFKISLHCPCCTFVPSNNYIIP
NKSEELETHFAGIDDSFHHSGDLKVYRKRRHSAQAPHLLMMLLPSYRLESQHKSHRSKRA
LDAAFCSRNVQDNCCLRSLYIDFKKDLGWRWIHEPKGYNANFCAGACPYLWSADTQHSKV
LGLYNTINPEASASPCCVSQDLEPLTILYYIGKTPKIEQLSNMIVKSCKCS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaactactgcgttttaagtcttctcctgaccttggatttagccactgtggccgtcagt
ttgtctacatgcagtacgctggacatggatcagtttatgaaaaagcgcatagaagccatc
cggggacagatactgagcaagctgaagctcacgagccccccggagacataccccaagcca
gaggaggtgtcgcgggatatcatcgccatctataacagcacgagggacctgttgcaggag
aaagccaacgaacgggcagcaacgtgtgagcgccaacgaagcgaggaggagtactatgca
aaagaggttcacaaaatcgacatgcaacccctctacccctctgagaatgtcatctctccc
atgcactacaacccgtactacagacggctcaccttcgacgtgacctccatggaaaagaat
gcctctaacctggtcaaagctgagctacgcgtcttccgtctccagaacaccaatgcccgt
gtgtctgaacagaggattgagctgtaccagattttaagtcacaaggacctggcttccccg
acgcagcgctacatcgacagcaaggtggtacgcacgcgcatggagggggagtggctgtct
tttgacgtgacagaggcagtcagtgaatggttgcttcacagagacagaaacagtggattc
aagatcagcttgcactgtccgtgctgcacgtttgtgccctcaaacaactacatcatcccc
aataagagtgaggagctggaaacccactttgcaggtatagatgacagcttccaccacagc
ggagacctgaaggtgtataggaagcggcgccacagcgcccaggctccacacctgctcatg
atgctgctgccctcctaccgcctggagtcccagcacaagagccaccgctccaaacgagcc
ctggacgctgccttctgctccagaaacgtccaggataactgctgcttgcggtcgctctac
atcgacttcaagaaggatctgggctggaggtggatccacgagcccaagggttacaacgct
aacttctgcgccggtgcctgtccctatctatggagcgctgacacccagcattccaaggtg
ctaggtctgtacaacaccatcaacccggaggcgtcagcttcgccctgctgtgtgtctcag
gatcttgaacctctcaccatcctctactacatcggcaagacccccaagatagagcagctc
tccaacatgatcgtcaagtcctgcaagtgcagctag
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