Salvelinus namaycush (lake trout): 120047582
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Entry
120047582 CDS
T07522
Name
(RefSeq) tumor necrosis factor-like
KO
K05468
lymphotoxin alpha (TNF superfamily, member 1)
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04060
Cytokine-cytokine receptor interaction
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120047582
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120047582
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
snh04052
]
120047582
Cytokines and neuropeptides [BR:
snh04052
]
Cytokines
Tumor necrosis fators
120047582
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Mobilization_B
Motif
Other DBs
NCBI-GeneID:
120047582
NCBI-ProteinID:
XP_038849047
UniProt:
A0A8U0QT31
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Position
Sna5:complement(47583358..47585121)
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AA seq
246 aa
AA seq
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MEGYAMTPGDMERGPVYNTTVTAVAERKASRGWLWRLCGVLLIAALCAAAALLFAWFQHG
RLATMQDEMEPQLEILIGAKDTHHTLKQIAGNAKAAIHLEGEYNPNLTADTVQWRKDDGQ
AFSQGGFELQGNQILIPHTGLFFVYSQASFRVKCNGPGEHTTPLSHVIWRYSDSIGVNAN
LLSGVRSVCQRNYGDAESNNGEGWYNAVYLGAVFQLNEGDKLWTETNRLTDVEPEQGKNF
FGVFAL
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtatgcgatgacacctggagacatggagaggggccctgtgtacaacacaacg
gtgacagctgttgctgagagaaaggcctccagaggttggctatggaggctttgtggggtc
ctcttaatagcagctttatgtgcggcagcagccctgctctttgcctggtttcagcatgga
agactggcaacgatgcaggacgaaatggagcctcaactggagatactcattggtgcaaaa
gatacccaccatacattgaagcagattgccggcaatgcaaaagcagccatccatttagag
ggtgaatacaatcctaatcttaccgctgacaccgtgcagtggagaaaggatgacggccag
gctttttcccagggcgggttcgagctacaggggaaccaaatcctcatcccacacactggg
ctcttcttcgtttacagccaggcttcgtttagggtcaagtgcaatggcccgggcgagcat
accactcctctgagtcacgttatttggcgctattcggactccatcggggttaatgctaat
cttcttagcggggtaaggtcagtttgtcaacgaaactacggtgatgctgagtccaataac
ggcgaaggctggtacaatgcagtttaccttggtgcagtgtttcagctgaatgaaggggac
aaactgtggactgagaccaatcgactgaccgacgtggagccagagcagggcaagaacttt
tttggtgtgtttgcactatga
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