Salvelinus namaycush (lake trout): 120047593
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Entry
120047593 CDS
T07522
Name
(RefSeq) retinoic acid receptor beta-like
KO
K08528
retinoic acid receptor beta
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120047593
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
snh03310
]
120047593
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120047593
Nuclear receptors [BR:
snh03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
120047593
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120047593
NCBI-ProteinID:
XP_038849060
UniProt:
A0A8U0QTL8
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Position
Sna5:complement(48254223..48268145)
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AA seq
442 aa
AA seq
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MFDYMDFLAVGPGETLDFYTASPCMLQEPSLTACFTGLTETDWQIHRIAQSVETQSSSSE
DLFASPLSPPPPPRTYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSVQKNMVYTCHRDNN
CIINKITRNRCQYCRLQRCFAAGMSKESVRNDRSKKKEKKETPKMTMIETYELTAELGCV
VENICRAHRETFPSLCQLGKYTTNSSSDTRIQLDLGLWDKFSELATKCIIKVVEFAKRVP
GFTGLTITDQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLTRTQIHNAGFGPLTD
QVFTFAGQLLPLEMDDTESGLLSAICLVSGDRQDLEEPSKVEVLQEPLLEALKIYSRKRR
PSMPLMFPKVLMKITDLRSISAKGAERVVTLKMEIPGSMPPLIQEMLEEMENLEKQKQSE
EEQRADKNITPTHTHSPCPQST
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactatatggattttctcgcagttggtccaggtgaaacgctggacttctatact
gcaagtccttgtatgctccaggaaccatctctaaccgcatgcttcactggactaacagaa
acggattggcaaattcatcggatcgcgcaatctgtggaaacccagagctccagctcagag
gacctgttcgccagtcctctctcacctccgccccctcctcgcacctacaaaccctgcttc
gtgtgccaagacaagtcttcaggctaccactatggcgtcagtgcttgtgagggctgtaag
ggtttcttccgtcgaagtgtccagaagaacatggtttacacgtgccaccgggacaataac
tgcatcatcaataagatcaccaggaaccgctgtcagtactgccggctacagaggtgcttc
gccgcgggcatgtccaaggagtctgtcaggaatgaccggagcaagaagaaggagaagaag
gagactcccaagatgaccatgatcgagacatatgagctgacagccgaactgggctgtgta
gtggagaatatctgtagggctcatagagagaccttcccttccctctgccagttgggcaaa
tacactacaaactcaagctcagacactaggatccagttggacctggggctgtgggataag
ttcagtgagctggccaccaaatgtatcatcaaggttgtggagtttgccaaacgggttcct
ggcttcaccggcctgactataactgaccagatcaccctcctcaaagcggcctgtctggac
attctgattctgcggatctgtacgaggtacacacctgaccaggacactatgaccttctca
gacgggctgaccttgacccgtacacagatccacaacgctggctttggcccgctcacagac
caggtgttcaccttcgccggccagcttctgcccttggagatggatgacacagaaagtggt
ctactcagcgccatctgcctggtgtctggagaccgccaggacctggaggagccgtctaag
gtggaggtcctgcaagagcccttactggaggccttgaagatctactcccgtaaacgccgg
cccagcatgcccctcatgttccccaaggtcctcatgaagataaccgacctgcgcagcatc
agcgccaaaggagctgagcgcgtggtgacgttgaagatggagatcccaggttccatgcct
cctcttatccaggagatgctggaggagatggagaacctggagaagcagaagcagtctgag
gaggagcagagagcagacaagaacatcacacccacacacacacactcgccatgtccacag
agtacatag
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