KEGG   Salvelinus namaycush (lake trout): 120047715
Entry
120047715         CDS       T07522                                 
Name
(RefSeq) ubiquitin-like protein ATG12
  KO
K08336  ubiquitin-like protein ATG12
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04068  FoxO signaling pathway
snh04136  Autophagy - other
snh04140  Autophagy - animal
snh04621  NOD-like receptor signaling pathway
snh04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    120047715
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    120047715
   04136 Autophagy - other
    120047715
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    120047715
   04622 RIG-I-like receptor signaling pathway
    120047715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:snh04131]
    120047715
   04121 Ubiquitin system [BR:snh04121]
    120047715
   03029 Mitochondrial biogenesis [BR:snh03029]
    120047715
Membrane trafficking [BR:snh04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    120047715
Ubiquitin system [BR:snh04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   120047715
Mitochondrial biogenesis [BR:snh03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    120047715
SSDB
Motif
Pfam: APG12 ATG8 XendoU
Other DBs
NCBI-GeneID: 120047715
NCBI-ProteinID: XP_038849197
UniProt: A0A8U0QTC5
LinkDB
Position
Sna5:complement(63400259..63403668)
AA seq 120 aa
MSDNAESPTETQKDEPPTPQQPTEDSGTADEKKKIDVLLKAVGDTPIMKTKKWSVEKGRT
VQSLSQFISRFLKMEANEQLFIYVNQSFSPSPDQEVGVLFECFGSDGKLVLHYCKSQAWG
NT seq 363 nt   +upstreamnt  +downstreamnt
atgtctgacaacgcagagtcccctacagaaacgcaaaaagatgagcctccaaccccacaa
cagcctacggaagactcggggacggcagacgagaagaaaaaaattgatgtgttgttgaag
gcagtaggagacacccccatcatgaagacaaagaaatggtcagtagagaaagggaggaca
gtgcaatcactctctcagttcatctctcggttcctcaagatggaggccaatgaacagctg
ttcatttacgtcaaccagtcattctctccctcgcctgatcaggaagtaggagtcctgttt
gaatgttttggcagcgatgggaagcttgttctacattattgtaaatctcaagcctgggga
taa

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