Salvelinus namaycush (lake trout): 120047819
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Entry
120047819 CDS
T07522
Name
(RefSeq) centrin-1-like
KO
K10840
centrin-2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
120047819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120047819
03036 Chromosome and associated proteins [BR:
snh03036
]
120047819
03400 DNA repair and recombination proteins [BR:
snh03400
]
120047819
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
120047819
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
120047819
Centrosome duplication proteins
Centriole replication proteins
120047819
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
120047819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_9
AIF-1
EF-hand_5
EF_EFCAB10_C
EH
SPARC_Ca_bdg
SurA_N_3
DUF7645
Dockerin_1
SUB1_ProdP9
TerB
RTP
SRI
dCache_2
TRCF
DUF445
LETM1_RBD
MJ1010-like_2nd
DUF3008
MgtE_N
Motif
Other DBs
NCBI-GeneID:
120047819
NCBI-ProteinID:
XP_038849287
UniProt:
A0A8U0QTI0
LinkDB
All DBs
Position
Sna5:6970403..6985686
Genome browser
AA seq
166 aa
AA seq
DB search
MQLNSSASQQKKSNPKTELTEELKQEIREAFELFDTDASGYIDVKELKVAMRALGFEPKK
EEIKRMITEVDKDETGKISFSDFLTVMTQKMAEKDSKEEILKAFRLFDDDETGKISFRNL
KRVAKELGESLTDEELQEMIEEADRDGDGEVNQGEFLRIMKKTSLY
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgaacagctcagcctcgcagcagaagaagtccaaccccaagacagagctcact
gaggagctgaaacaggagatcagagaggcctttgaactgtttgacaccgacgcctccgga
tacatcgatgtcaaggagctaaaggttgctatgagggcgctggggttcgagccgaagaaa
gaggagattaagaggatgataacagaggtggataaggacgaaacaggaaagatctccttc
tctgacttcctcaccgtcatgactcagaagatggctgagaaggattctaaggaggagatc
ctgaaagcattccgtctgtttgatgatgatgagacggggaagatctccttcaggaacctg
aagagggtcgctaaggaactgggagagagcctgactgacgaggaactgcaggagatgatt
gaggaggcagacagggatggagacggagaggtgaaccagggagagttcctccgcatcatg
aagaagaccagcctgtactga
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