KEGG   Salvelinus namaycush (lake trout): 120047819
Entry
120047819         CDS       T07522                                 
Name
(RefSeq) centrin-1-like
  KO
K10840  centrin-2
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    120047819
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:snh03019]
    120047819
   03036 Chromosome and associated proteins [BR:snh03036]
    120047819
   03400 DNA repair and recombination proteins [BR:snh03400]
    120047819
Messenger RNA biogenesis [BR:snh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     120047819
Chromosome and associated proteins [BR:snh03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    120047819
   Centrosome duplication proteins
    Centriole replication proteins
     120047819
DNA repair and recombination proteins [BR:snh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      120047819
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 AIF-1 EF-hand_5 EF_EFCAB10_C EH SPARC_Ca_bdg SurA_N_3 DUF7645 Dockerin_1 SUB1_ProdP9 TerB RTP SRI dCache_2 TRCF DUF445 LETM1_RBD MJ1010-like_2nd DUF3008 MgtE_N
Other DBs
NCBI-GeneID: 120047819
NCBI-ProteinID: XP_038849287
UniProt: A0A8U0QTI0
LinkDB
Position
Sna5:6970403..6985686
AA seq 166 aa
MQLNSSASQQKKSNPKTELTEELKQEIREAFELFDTDASGYIDVKELKVAMRALGFEPKK
EEIKRMITEVDKDETGKISFSDFLTVMTQKMAEKDSKEEILKAFRLFDDDETGKISFRNL
KRVAKELGESLTDEELQEMIEEADRDGDGEVNQGEFLRIMKKTSLY
NT seq 501 nt   +upstreamnt  +downstreamnt
atgcagttgaacagctcagcctcgcagcagaagaagtccaaccccaagacagagctcact
gaggagctgaaacaggagatcagagaggcctttgaactgtttgacaccgacgcctccgga
tacatcgatgtcaaggagctaaaggttgctatgagggcgctggggttcgagccgaagaaa
gaggagattaagaggatgataacagaggtggataaggacgaaacaggaaagatctccttc
tctgacttcctcaccgtcatgactcagaagatggctgagaaggattctaaggaggagatc
ctgaaagcattccgtctgtttgatgatgatgagacggggaagatctccttcaggaacctg
aagagggtcgctaaggaactgggagagagcctgactgacgaggaactgcaggagatgatt
gaggaggcagacagggatggagacggagaggtgaaccagggagagttcctccgcatcatg
aagaagaccagcctgtactga

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