Salvelinus namaycush (lake trout): 120047830
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Entry
120047830 CDS
T07522
Name
(RefSeq) transcription termination factor 1-like isoform X1
KO
K15225
transcription termination factor 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120047830
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
120047830
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120047830
NCBI-ProteinID:
XP_038849299
UniProt:
A0A8U0UEJ5
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Position
Sna5:268887..294942
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AA seq
681 aa
AA seq
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MEVPDPDERTEERTKKKSNKIHTQRDEAMSSWKKNKTRNDTETEEGMDSGLSASAVDVSD
VRVPEEARKSKKKHKNKQTKLEEGAESRQTVLRLDDPEIIELYTEAVEGGENVVTEVQKK
VKEKRKRKEIVGEIQLNICPDETELPGILEQTGRKWKTTSRLRTQPDGGAVEGSRRRKRQ
PDGGAVEGSRRKRQPDGGAVEGSRRRKRQRCRESDTGMDSVPSKSDNRTPDAAPESETGE
DGPHATTVETSTQHRRRIQNDKALSEKEWRAVIELKEFVPNVESLSVLRIRVMIKYDLDR
FKEFRRQGISLRTGRYSAQENKQLMSNINEFLALTGIENAAKLFHTKRFKDELTQIQRLK
SHHRFPERIAEGIPRPWHKIYSRGGRKMFDGSSYKGRRRFSEDELYSLKKLQTLHGNNWV
KISQLTGRSETPLRKRFSQMFANLGSWSEEELKRLMEAVRDHLLGQVEPGRGHATIRKDK
LYNNIPWTDVCRRVKTRHRDQCRMKWLGVMAHKMTYGQPVFSGGVKTVKAKVDLIKALNA
MQVEDATDIDWEEIAHTIGGVTPCYVQMHYHKLKVAKVPLRQSMSFCEIIDFLYSSVLPK
FEELLRHSQTEPGETESRDLHQVQTESGETESRDLHQVQTESGETESRDLHQVQTESGET
ESRDDPQELFLLSEIFENEDD
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaccagatcctgacgaacgaactgaagagagaactaagaaaaagtcaaacaag
attcacacacaacgtgacgaggcgatgagtagctggaagaaaaataaaacccgtaatgac
acagagacagaagaggggatggacagtggcctctcagcgtctgcagtagatgtctcagat
gtaagggtgccagaggaggccagaaagagtaagaagaagcacaagaacaaacaaacgaag
cttgaagagggagcggaaagccgtcagacagttttaagattagatgatcctgaaatcata
gaactatacactgaagcggttgagggaggggaaaatgtggtaacggaggtacagaagaag
gtaaaggagaagaggaaacgaaaggaaatagttggagagattcaactgaacatttgtcca
gatgaaacagagctcccaggtattctagaacaaactgggagaaaatggaaaacaacatcg
aggctgagaacacaaccggatggaggggctgtagagggcagcaggagaagaaagagacaa
ccagatggaggggctgtagagggcagcaggagaaagagacaaccagatggaggggctgta
gagggcagcaggagaaggaagagacaacgctgcagagagtccgacacgggaatggacagt
gtcccctctaagtctgacaacaggactcctgatgctgcaccagaatctgagacaggggaa
gatggcccccatgcaaccacggttgagacaagcacccaacaccgcagacgcatccaaaac
gataaagctctcagtgaaaaagaatggagggctgtgattgagctcaaagagtttgttccc
aatgttgagtctctgtctgttttgaggatcagagtaatgatcaagtatgatcttgatcga
ttcaaggaattccgaagacaaggcatttccctgcgaactggacgatacagcgcacaggag
aacaaacaactcatgagtaacataaacgaattcctggctctcacagggattgagaatgct
gctaaactcttccatacaaagcgcttcaaagacgaactgacacaaatccagaggttgaag
agtcatcacaggttccctgaaagaatagctgaaggaatcccaaggccttggcataagatc
tatagtcgtggtgggaggaaaatgtttgatggcagcagctacaagggcagacgaaggttc
agcgaagatgaactttactctttgaaaaaactgcagacgttgcacggcaacaattgggtg
aagatctcgcagttgactggccggagtgaaacgccgctcaggaagcgtttttctcagatg
ttcgcaaacttaggttcttggagcgaggaagaactgaagagactaatggaagctgtgaga
gaccacctgctgggacaggtggagcctggcagaggacatgccaccatcaggaaagacaag
ctgtacaacaacatcccctggacagatgtatgccggagggttaagacacgccaccgggac
cagtgtagaatgaaatggttgggtgttatggcacacaaaatgacatatggacaaccagta
ttcagcggaggtgtgaaaaccgtaaaggctaaagtggatttgatcaaagcgttgaacgca
atgcaggtggaagatgcaacagatattgactgggaagaaattgctcacacaattgggggt
gtgactccttgctacgtgcagatgcactaccacaagctgaaagtagccaaagtgccattg
agacagagcatgtctttctgtgagatcattgatttcctgtacagtagtgttctgcccaag
tttgaagagctcctccgacacagtcagactgagccaggagagaccgagtccagagatctc
caccaggttcagactgagtcaggggagaccgagtccagagatctccaccaggttcagact
gagtcaggggagaccgagtccagagatctccaccaggttcagactgagtcaggggagact
gagtccagagacgatccacaagagctcttcctgctctcagagatctttgaaaatgaggac
gactga
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