Salvelinus namaycush (lake trout): 120047832
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Entry
120047832 CDS
T07522
Name
(RefSeq) transcription termination factor 1-like isoform X1
KO
K15225
transcription termination factor 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120047832
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
120047832
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Nrf1_DNA-bind
Myb_DNA-bind_4
Motif
Other DBs
NCBI-GeneID:
120047832
NCBI-ProteinID:
XP_038849302
UniProt:
A0A8U0QTJ3
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Position
Sna5:complement(307677..321441)
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AA seq
607 aa
AA seq
DB search
MLGTTTGRKRKKEIVGEIQLNICPDETELPGILEQTGRKWKTTLRLRTQPDGGAVEGSRR
RKRQPDGGAVEGSRRKRQPDGGAVEGSRRKRQPDGGAVEGSRRRKRQPDGGAVEGSRRKR
QPDGGAVEGSRRKRQPDGGAVEGSRRRKRQRCRESDTGMDSVPSKSDNRTLDAAPESETG
EDGPHATTVETSTQHRRRIQNDKALSENEWRAMIELTEFVPNIASRPVNKIRAMIKYDLY
RFKEFRRQGISLRTGRYSAQENKQLMSNINEFLALTGIENAAKLFHTKRFKDELTQIQRL
KSHHRFPERIAEGIPRPWHKIYSRGGRKMFDGSSYKGRRRFSEDELYSLKKLQTLHGNNW
VKISQLTGRSETPLRKRFSQMFANLGSWSEEELKRLMEAVRDHLLGQVEPGRGHATIRKD
KLYNNIPWTDVCRRVKTRHRDQCRMKWLGVMAHKMTYGQPVFSGGVKTVKAKVELIKALN
AMQVEDATDIDWEEIAHTIGGVTPCYVQMHYHKLKVSKVPLRQSMSFCEIIDFLYSSVLP
KFEELLRHSQTEPGETESRDLHQVQTESGETESRDLHQVQTESGETESRDDPQELFLLSE
IFENEDD
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgctggggacgacaacaggaaggaaacgaaagaaggaaatagttggagagattcaactg
aacatttgtccagatgaaacagagctcccaggtattctagaacaaactgggagaaaatgg
aaaacaacattgaggctgagaacacaaccggatggaggggctgtagagggcagcaggaga
agaaagagacaaccagatggaggggctgtagagggcagcaggagaaagagacaaccagat
ggaggggctgtagagggcagcaggagaaagagacaaccagatggaggggctgtagagggc
agcaggagaagaaagagacaaccagatggaggggctgtagagggcagcaggagaaagaga
caaccagatggaggggctgtagagggcagcaggagaaagagacaaccagatggaggggct
gtagagggcagcaggagaaggaagagacaacgctgcagagagtccgacacgggaatggac
agtgtcccctctaagtctgataacaggactcttgatgctgcaccagaatctgagacaggg
gaagatggcccccatgcaaccacggttgagacaagcacccaacaccgcagacgcatccaa
aacgataaagctctcagtgaaaacgaatggagggctatgattgagctcacagagtttgtt
cccaatattgcatctcgtcctgttaataagatcagagcgatgatcaagtatgatctttat
cgattcaaggaattccgaagacaaggcatttccctgcgaactggacgatacagcgcacag
gagaacaaacaactcatgagtaacataaacgaattcctggctctcacagggattgagaat
gctgctaaactcttccatacaaagcgcttcaaagacgaactgacacaaatccagaggttg
aagagtcatcacaggttccctgaaagaatagctgaaggaatcccaaggccttggcataag
atctatagtcgtggtgggaggaaaatgtttgatggtagcagctacaagggcagacgaagg
ttcagcgaagatgaactttactctttgaaaaaactgcagacgttgcacggcaacaattgg
gtgaagatctcgcagttgactggccggagtgaaacgccgctcaggaagcgtttttctcag
atgttcgcaaacttaggttcttggagcgaggaagaactgaagagactaatggaagctgtg
agagaccacctgctgggacaggtggagcctggcagaggacatgccaccatcaggaaagac
aagctgtacaacaacatcccctggacagatgtatgccggagggttaagacacgccaccgg
gaccagtgtagaatgaaatggttgggtgttatggcacacaaaatgacatatggacaacca
gtattcagcggaggtgtgaaaaccgtaaaggctaaagtggaattgatcaaagcgttgaac
gcaatgcaggtggaagatgcaacagatattgactgggaagaaattgctcacacaattggg
ggtgtgactccttgctacgtgcagatgcactaccacaagctgaaagtatccaaagtgcca
ttgagacagagcatgtctttctgtgagatcattgatttcctgtacagtagtgttctgccc
aagtttgaagagctcctccgacacagtcagactgagccaggagagaccgagtccagagat
ctccaccaggttcagactgagtcaggggagaccgagtccagagatctccaccaggttcag
actgagtcaggggagactgagtccagagacgatccacaagagctcttcctgctctcagag
atctttgaaaatgaggacgactga
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