Salvelinus namaycush (lake trout): 120047850
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Entry
120047850 CDS
T07522
Name
(RefSeq) pre-mRNA-splicing factor SLU7-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120047850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120047850
Spliceosome [BR:
snh03041
]
Complex C
Other components
Step II factors
120047850
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Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
120047850
NCBI-ProteinID:
XP_038849329
UniProt:
A0A8U0UEK5
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Position
Sna5:complement(4601882..4609196)
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AA seq
584 aa
AA seq
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MPEEEEAATAATSADGVVGLEEPKKMTREDWRKKKELEEQRKLGNAPAEVDEEGKDINPH
IPQYISSVPWYIDPSKRPTLKHQRPQEERQQQFSSIEEWYRRGVQEKAISTKFRKGACDN
CGAMTHKKKDCLERPRKVGAKFTGNGMAPDEHSQISLDLDYDGKRDRWNGYDPEDHMRIV
EEYAKVDQAKQTLKSQKLHEELASGKLTDQASSSRKWDDGERTQEQNSEDEDEDKYADDI
DMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPDSAYYDPKTRAMRENPYQNTGMVPEDV
GFAGDNFVRYSGDTVTMAQTQLFAWEAYDKGSEVHLQADPTKLELLHQSFKVKKEDFKDK
QKETILDKYGGEEHLDAPPRELLLAQTEDYVEYSRHGAVLKGQEKAVARSKYEEDVLTQN
HACIWGSYWREGCWGFKCCHSMVKQSYCTGEAGIKTTSSSACVPFEEGLEQEEEEEPRTL
LEMHREKLKEKKKKKQKKKKKKHGSDSSDSEEDEEKKKQKLNKALAAEDVRLKQVEEMMK
VDERKRKYNSLQEIKEPTEEEMEAFRMKRSREDDPMANFLELGQ
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgccggaggaagaagaggcagcgacggctgcgaccagcgccgatggggtggtgggtctg
gaagaacctaagaagatgaccagagaggattggaggaagaagaaggagttagaggaacag
agaaaactgggaaatgctcctgctgaggtagatgaagagggaaaggacatcaaccctcac
attccccagtacatctcctcagtgccctggtacatcgacccctctaagagacccacctta
aagcaccagaggccccaggaggagaggcaacaacagttctcctccatcgaggagtggtac
aggagaggggtgcaagagaaagccatcagcaccaagttcagaaagggagcttgtgataac
tgcggtgctatgacacacaagaagaaggactgcttggagcggcccagaaaggtgggggca
aagttcacaggtaacggcatggcccccgacgaacacagccagatctctctggatctggac
tacgatgggaagagggaccgctggaacggctacgaccctgaggatcacatgcgtattgtg
gaggagtacgccaaagtagaccaggccaaacaaacactgaaatctcagaaactccatgag
gagttggcttcagggaaactcacggaccaagcaagctcctcaagaaagtgggatgatggc
gaacgcacacaggagcaaaacagtgaggatgaggatgaagataagtacgctgatgacatc
gacatgccgggacagaactttgactccaagagacgaatcacagtcagaaacctgcgtatc
agagaagacattgctaagtacttgagaaatctggatccagactctgcttactacgacccc
aagactcgagccatgagagagaacccctaccagaacactggcatggttcctgaagatgtg
gggttcgcaggagacaactttgtacgttactctggagacaccgtcaccatggcacagaca
cagctctttgcgtgggaggcctatgataagggctctgaggtgcacctccaggccgacccc
accaagctggagctgctgcaccagtccttcaaggtcaagaaggaggatttcaaggacaaa
cagaaggagactatcctggataagtacgggggtgaggagcacctggacgccccccccaga
gagctgctgctggcccagactgaggactacgtggagtacagtcgtcacggtgccgtgctg
aagggacaggagaaggctgtggcacgctccaaatacgaagaggacgtactcacccagaac
catgcgtgtatctgggggtcgtactggagagaaggctgctggggcttcaagtgctgccac
tccatggtcaaacagagctactgcaccggagaggctggcatcaaaactacaagctcctcg
gcctgtgttccgtttgaggagggacttgagcaggaggaagaggaggagcctaggactcta
ctggagatgcacagagagaaacttaaagagaagaagaagaagaagcagaagaagaagaag
aagaagcacggctcagacagcagcgactctgaggaagatgaggaaaagaagaaacagaaa
ctgaacaaggccctggctgcagaggacgtgcgtctgaagcaggtagaggagatgatgaaa
gtggatgagaggaagaggaagtacaacagcctgcaggagatcaaggagcccacggaggag
gagatggaggcattcaggatgaaacgctccagggaagacgaccccatggccaacttcctg
gagctggggcagtga
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