Salvelinus namaycush (lake trout): 120047854
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Entry
120047854 CDS
T07522
Name
(RefSeq) vesicular integral-membrane protein VIP36-like isoform X1
KO
K10082
lectin, mannose-binding 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120047854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120047854
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
snh04091
]
120047854
Membrane trafficking [BR:
snh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
120047854
Lectins [BR:
snh04091
]
L-type lectins
120047854
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Lectin_L-type_dom
Motif
Other DBs
NCBI-GeneID:
120047854
NCBI-ProteinID:
XP_038849336
UniProt:
A0A8U0QVD4
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All DBs
Position
5:complement(4531877..4536995)
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AA seq
345 aa
AA seq
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MVSFRGSKMRGVGTFISRPLLFLLLHFTLVKCDITDGNAEHLKREHSLMKPYQGVGSSPS
SQWDFWGSTLVTSSYVRLTPDERSKQGSIWNTVPVHLKDWEMHVQYKIHGSGKKNLHGDG
IAIWYTKERLHPGPVFGNQDHFVGLALFVDTFRNDLHGLDHSFPYISAMVNNGSLPYDHG
NDGHTSELGGCSSEIRNKDHDTYLAIRYSKGRLTVMIDIDDKNEWKECIDIGGVRLPTGY
YFGASAATGDLSDNHDIISMKMYQLMVEHTPDEDSLDWTKIEPSVSLLKSPKDNIDDPTG
NFRSTPLTGWKVFLLLLCALLGIVVCGVVGAVVFQKRQERNRRFY
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctttccgaggcagcaaaatgagaggcgttggtacatttatcagcagaccactg
cttttcctattacttcactttactctagtgaaatgcgatataacagacggaaatgcagag
cacttaaagcgggagcattcgctcatgaaaccgtaccagggtgttggaagcagcccatcc
agtcagtgggacttctgggggagcacgctagtcaccagctcctatgtgcgcctgacacct
gatgagagaagtaaacagggatccatatggaacacagtgcctgttcatctgaaagactgg
gagatgcacgtgcagtacaagatccacggttcggggaagaaaaatctccatggagacggc
atcgccatctggtacacgaaggagagacttcatccaggcccagtctttggaaaccaagat
cattttgttggcctggctttatttgtggataccttccgcaatgatctccatgggctggat
cattccttcccctacatctctgccatggtgaataatggttctctgccctatgaccatggg
aatgatggacatacctctgaactgggaggctgttcttctgaaatcaggaacaaagaccat
gacacctacctggccattcgctactctaagggcagactcacggtgatgattgacattgat
gataagaatgaatggaaagagtgcattgacatcgggggtgtccgcctccccacggggtac
tactttggggcttctgctgctacaggagatctctctgataaccatgacatcatctctatg
aagatgtatcaactgatggtggaacacacacctgatgaggacagtctggactggaccaag
attgagccaagtgttagcctgctgaagtcccccaaagacaacattgatgatcctactggt
aacttccgaagcacacctcttactggctggaaggtcttcctgcttctgctatgtgctcta
ctgggaattgtagtttgtggtgttgtaggggctgtagtctttcagaagcgccaggaaaga
aacaggaggttttactga
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