Salvelinus namaycush (lake trout): 120047901
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Entry
120047901 CDS
T07522
Name
(RefSeq) lysine-specific demethylase 2B-like
KO
K14960
COMPASS component SPP1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120047901
03036 Chromosome and associated proteins [BR:
snh03036
]
120047901
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
120047901
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
120047901
COMPASS/SET1 complex (yeast)
120047901
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CXXC
DUF5331
Motif
Other DBs
NCBI-GeneID:
120047901
NCBI-ProteinID:
XP_038849421
UniProt:
A0A8U0UF08
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Position
Sna5:7030413..7040929
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AA seq
364 aa
AA seq
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MSKLQLLNLYATERPTAAAALEIAVAKETTIVELHEEVYRLKEENGRLRRLLDLVFKPEI
RLHRADPHQLTHLISEEVPPEQQHCGQEWSPSLIQEDPVPTQIKEEQEELQTSQEEEQLQ
GPFDTKDSIFTSPFVESDCDQEDSPQPSHLHQTQTVEDRERGSLVTNTSIEIKIEPDGED
YRVSEPASDTQPLSAVNPDCSAAPSENMESDDEVESGGLQSGSKTLESKRKQTKKGERFH
TSAGGRTATMLPNLTSSRQTYAAPNCKVKRTVRMCGKCEPCRRTEDCAQCDFCKDMKKFG
GPSKTRQKCRLRQCDVHAPEMLRVKDEEFDLSGFRSRESLRRGGHPSDDSENEMECDEAA
RPSL
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagctacagttgttgaacttgtatgctactgaacgaccaacagcggctgctgct
ctagagatagccgtagccaaagagacaaccatagtagagttgcatgaagaagtctaccgt
ttgaaggaggagaatggccgtctacgaagactgttggatttggttttcaagccagagata
aggttacacagagcagatccccaccagctcactcacctcatatctgaagaggttccccct
gaacagcagcactgtgggcaggagtggagccccagtctgattcaggaggacccagtgccc
acacagattaaagaggaacaggaggaactacagaccagtcaagaggaagagcagcttcaa
gggccctttgataccaaagactccatattcacttctccctttgtggaaagtgactgtgat
caggaagactcacctcagccctcacatctacaccaaacccaaactgtggaggaccgagag
aggggctctctagtcaccaacacatctatagagatcaaaatagaacctgatggagaggat
tacagagtatcagaaccagccagtgacactcagcccctctctgcagtaaatccagactgt
tctgcagctccgagtgaaaacatggaaagtgatgatgaggtggagagtggaggactacaa
tcagggtctaagacactcgaatcaaaaagaaaacagacaaagaaaggagaaaggttccat
accagtgctggaggcaggacagccactatgctgcccaatttgacatcctctaggcaaacg
tatgctgctcctaattgcaaggtgaagcgtacggtccgtatgtgtgggaagtgtgagcca
tgcaggaggactgaggactgtgctcagtgtgatttctgtaaagacatgaagaagtttgga
ggacccagtaagaccagacagaagtgcagactcaggcagtgtgacgtccatgctccggaa
atgctgcgtgtgaaggatgaggagtttgacctgtctggcttcaggagcagggagagcctg
aggagaggaggacatccgtctgacgacagtgagaatgagatggagtgtgatgaagctgca
cgcccgtcactataa
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