Salvelinus namaycush (lake trout): 120047923
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Entry
120047923 CDS
T07522
Symbol
cyfip2
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04810
Regulation of actin cytoskeleton
snh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
120047923 (cyfip2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120047923 (cyfip2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120047923 (cyfip2)
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120047923 (cyfip2)
Factors involved in mRNA localization
Other mRNA localization factors
120047923 (cyfip2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
120047923
NCBI-ProteinID:
XP_038849468
UniProt:
A0A8U0UE71
LinkDB
All DBs
Position
Sna5:8754003..8821872
Genome browser
AA seq
1181 aa
AA seq
DB search
MLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVTKLMKFMYFQRK
AIERFCGEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCSVKNDHSAYKRA
AQFLRKMADPQSIQESQNLSMFLANHNRITQCLQQQLEVIPGYEELLADIVNISVDYYEN
KMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLGKIDKFFKLQVVPLFGDMQ
IELSRYIETSAHYEENKSKWTCTQSSISPQYNLCEQMVQIRDDHIRFISELARYSNSEVV
TGSGLDSQKSDEEYRELFDLALRGLQLLSKWSTHVMEVYSWKLVHPTDKFCNKDCPGTAE
EYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNQAIRNTIYAALQDFAQMTLR
EPLRQAVRKKKNVLISVLQAIRKTICDWEGAREPPNDPCLRGEKDPKGGFDIKVPRRAVG
PSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKHSFFFTHLLNFSEALQ
HCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMMEYVLYPLDLYND
SGYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMSGSVLLDKRFRAECKN
YGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLDQAISRFESEDLT
SIVELEWLMDINRLTHRLLSKHMTLDSFDAMFREANHNVSAPYGRITLHVFWELNFDFLP
NYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHIYSSYRNFVGPPH
FKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICRLPRHEYGSPGIL
EFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCDLLHAAPFQNILP
RVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLLTKERLCCGLSMF
EVILTRIRSFLQDAVWRGPPPTNGVMHVDECMEFHRLWSAMQFVYCIPVGTHEFTAEQCF
GDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPLKKMADRIRKYQI
LNNEIFAILNKYMKAVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgctggaggagggccatgagtacgctgtcatgctctacacctggagaagctgctcaaga
gctataccacaggtgaagtgtaacgagcagcccaacagggtagagatctatgagaagact
gtggaggtgctggaaccagaggtcaccaagctcatgaagttcatgtacttccagcgtaag
gctatcgagcgtttctgcggggaggtgaagcgtctttgccatgctgagcggaggaaagac
tttgtctctgaagcctacctcctcaccctgggcaagttcatcaacatgttcgctgtgctc
gacgaactcaagaacatgaagtgcagcgtcaagaacgaccactctgcctataaaagggca
gctcagttcctgaggaagatggccgaccctcagtccatccaggagtcacagaacctctcc
atgttcctagccaatcacaacagaatcactcagtgtctgcagcagcagctggaggtgatt
cctggctatgaggagttgttagcagacattgtcaacatcagtgttgattactatgagaac
aagatgtacttgacgcccagcgagaaacacatgctgctcaaggtgatgggttttggtctc
tatctgatggacggtaacgtcagtaacatctacaaactagacgccaagaagaggatcaac
ctgggaaagatcgacaagttcttcaagctgcaggtggtgcctctgtttggagacatgcag
atagaactatcacgttacatagagaccagtgctcactacgaggagaacaagtccaagtgg
acgtgtacccagagctccatttctccccagtacaacctgtgtgagcagatggttcagatt
cgagacgaccacatccggttcatctctgagctggctcgctacagtaacagtgaggtagtg
accgggtcaggcctggacagtcagaaatcagacgaggaatacagggaactgtttgacctg
gcactcagagggttacagctgctgtccaagtggagcacacacgtcatggaagtgtactcg
tggaagttggtccacccgacagataagttctgtaacaaggactgtcctggcacagcggag
gagtatgagagagctacacgttacaactacacctcagaggagaagtttgcactggtcgag
gtcatcgccatgatcaagggactgcaggtgttgatgggtcgtatggagagcgtattcaac
caggccataaggaacaccatctatgcagccctgcaggactttgcccagatgaccctcaga
gagcctctacgtcaggccgtacgcaagaagaagaacgttctcatcagtgtcctgcaggca
atccgtaagaccatctgtgactgggagggggctcgggagcctcccaatgacccctgtctc
aggggggagaaggaccccaagggagggttcgacatcaaggtgccccgcagagctgtggga
ccctcgagcacacagctgtacatggtccgaaccatgctggagtcgttgatagccgataag
agtggttctaagaagactctacgcagcagtctggatggacccatagtactggctatagaa
gacttccacaaacactccttcttcttcacacacctgctcaacttcagtgaggcgctgcag
cactgctgtgacctgtctcagctgtggttcagagagttcttcctggagttgaccatgggt
cgcaggatccagttccccatcgagatgtccatgccctggatcctcacagaccacatactg
gagaccaaggagccatccatgatggagtatgtgttgtaccctctggacctctacaatgat
agtggctactacgctctgaccaagttcaagaaacagttcctctacgatgagatagaggct
gaggtgaacctgtgcttcgatcagtttgtctacaagctggctgaccagatatttgcctat
tacaaagccatgtctggaagtgtcctcctggacaagcgtttcagggcagagtgtaaaaac
tatggtgtgatcatcccctatcccccctccaaccgttatgagaccctgctcaaacagaga
cacgtacagcttctgggtcgctccatcgatctgaaccgtctgatcacccagaggatctca
gcagccatgtacaagtctctggaccaggccatcagccgctttgagagtgaagacctcacc
tccatagtggagttggagtggctgatggacatcaacagactgactcatcgtctgctttcg
aagcacatgaccctggacagcttcgacgccatgttccgtgaggccaaccacaatgtgtct
gccccctacggacgcatcacgctccatgtcttctgggaactcaactttgacttcctcccc
aactactgttacaacggctccaccaaccgcttcgtgcggactgccatcccctttacccag
gagcctcagcgagacaagccggccaacgtgcagccgtactacctgtatgggtctaagcct
ctgaacattgcctactcccacatctatagctcctacaggaacttcgtaggcccgccccac
ttcaaaaccatctgccgtctccttggttaccagggcatcgccgtggtgatggaggaactg
ctcaagatagtcaagagcctgttgcagggcactatcctgcagtatgtgaagactctgatc
gaggtaatgcccaagatctgtcgcctgccgcgccacgagtacggatccccaggtatcctg
gagttcttccaccaccagctgaaggacattatagagtacgcagagctgaagacagatgtc
ttccagagtctcagagaggtggggaatgccatcctcttctgtctgctcatcgaacaagct
ctgtcccaggaggaagtgtgtgacctgcttcatgcagcccccttccagaacatcctcccc
agggtctacatcaaagagggggagcgtctggaagtcaggatgaagaggctggaggctaag
tatgctcctctccatctggtgcccctcatcgagaggctggggacccctcagcaaatagct
atagcccgtgagggggatctgttgaccaaagagcgtctttgctgtggcctgtccatgttc
gaggtgatccttacgaggatccgtagtttcctgcaggacgccgtgtggcgaggcccgccc
cccaccaatggcgtgatgcacgtggatgagtgtatggagttccaccgcctctggagcgcc
atgcagtttgtttactgcatacccgtcggcactcacgagttcaccgcagagcagtgtttt
ggtgacgggctgaactgggcaggctgttccatcatcgtgctgttgggtcagcagcgccgc
ttcgacctgtttgacttctgctaccacctgctcaaggtgcagaggcaggacggcaaggat
gagatcatcaagaacgtgccgctgaagaagatggctgatcggatcaggaagtaccagatc
ctgaacaatgagatctttgccatccttaacaagtacatgaaggctgtggagacggatagt
tccaccgtggagcatgtccgctgcttccagccacctatacaccagtccctggccacaaca
tgctga
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integrated database retrieval system
