Salvelinus namaycush (lake trout): 120048029
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Entry
120048029 CDS
T07522
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase D-like isoform X1
KO
K05864
peptidyl-prolyl isomerase D [EC:
5.2.1.8
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04217
Necroptosis
snh04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120048029
04218 Cellular senescence
120048029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
snh03110
]
120048029
Enzymes [BR:
snh01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
120048029
Chaperones and folding catalysts [BR:
snh03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
120048029
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
TPR_1
TPR_2
TPR_11
TPR_19
TPR_12
TPR_16
TPR_8
MIT
DUF3856
TPR_9
Seryl_tRNA_N
DnaJ-X
Motif
Other DBs
NCBI-GeneID:
120048029
NCBI-ProteinID:
XP_038849631
UniProt:
A0A8U0UF76
LinkDB
All DBs
Position
Sna5:19447073..19451025
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AA seq
371 aa
AA seq
DB search
MSNATPVIKPSNKENTRVFLDVDIGGERVGRIVFELFADVVPKTAENFRALCTGEKGTGK
TTGKPLHFKGCPFHRIIKQFMIQGGDFSNQNGTGGESIYGEKFEDENFYYKHDKEGLLSM
ANSGPATNGSQFFITTMPTAHLDGKHVVFGQVLKGMGLVKTLEAIETNEDTPVKPCVIAE
CGEHKDGDDWGVAPNDGSGDTHPDYPEDSNVDLKDVDKVLSAAEDIKNIGNNFFKNQDWQ
SAIKKYSKALRYLALGGDEQEIEKAQAKLEPTALSCILNTAACKLKMQLWQEAMDSCDEA
LELNQKNTKALFRRAQAWQGLKEYSKAMSDLKKAQEIAPEDKAIGNEMKRVQIKVKEEKE
KEKQIYSKMFA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgcaacaccagtgatcaagccttcaaacaaagaaaacacccgtgtcttcctt
gatgtagacattggtggtgaaagagttggccgaatcgtgttcgaactgtttgctgatgtt
gtccccaaaactgctgaaaactttcgagcactctgtactggtgaaaagggaactggcaaa
accacagggaaaccactccatttcaaaggatgtccttttcacaggatcatcaagcaattc
atgatccagggaggtgatttctccaaccagaatggcactggaggagagagcatctatggg
gagaaatttgaagatgagaacttctattacaagcacgacaaagagggcttgctgagtatg
gccaattctggaccagccaccaatggctcccagtttttcatcaccactatgcctactgct
catctagatggcaaacatgtggtctttggacaagtcttgaaggggatggggctggtgaaa
acactggaggccatagagaccaacgaggacacgcctgtcaagccatgtgtaattgctgag
tgtggtgagcataaagatggcgacgactggggagtagcaccgaatgatggctcaggggac
acccatccagactacccagaggactccaacgttgacctaaaagatgttgacaaagtcctg
tctgctgctgaagatattaagaatattgggaacaacttcttcaagaaccaagactggcag
tctgcaatcaagaagtactccaaagctctcaggtatctggcgcttggcggagacgagcag
gagattgagaaggcccaagcgaagctggagcccacagcgttgagctgcattctcaacaca
gctgcctgtaaactgaagatgcagctctggcaggaagccatggacagttgtgacgaggca
ctggagttgaaccagaaaaacactaaggctctgttcaggagggcccaggcctggcaagga
ctgaaggagtacagtaaagccatgagtgatctgaagaaagctcaagaaattgcaccagag
gataaagcaatcggaaacgagatgaagagagtccagataaaagtgaaggaggaaaaggag
aaagagaagcaaatctattccaaaatgtttgcatga
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