KEGG   Salvelinus namaycush (lake trout): 120048048
Entry
120048048         CDS       T07522                                 
Name
(RefSeq) calnexin-like isoform X1
  KO
K08054  calnexin
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04141  Protein processing in endoplasmic reticulum
snh04145  Phagosome
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120048048
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120048048
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:snh03110]
    120048048
   04131 Membrane trafficking [BR:snh04131]
    120048048
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:snh04091]
    120048048
Chaperones and folding catalysts [BR:snh03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   120048048
Membrane trafficking [BR:snh04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Others
    120048048
 Autophagy
  ER-phagy
   Other ER-phagy associated proteins
    120048048
Lectins [BR:snh04091]
 L-type lectins
  120048048
SSDB
Motif
Pfam: Calreticulin Piezo_TM1-24 Neur_chan_memb DDHD PFF1_TM SID-1_RNA_chan
Other DBs
NCBI-GeneID: 120048048
NCBI-ProteinID: XP_038849657
UniProt: A0A8U0QUB2
LinkDB
Position
Sna5:21842205..21865490
AA seq 635 aa
MELNVRCVVLLAVGLCSTLLLTTVATHQEEEEPIMELAEDMGVEDELEDLGLGEELLDGE
VDPEDTDTPPGPPPAPKVTYKAPEPMGEHFFAESFDRGTLDSWVLSKAKKEDIDEDIAKY
DGKWEVEDMKDSKLPGDKGLVLKSRAKHHAISAQLLRPFIFDTKPLIVQYEVNFQQGIDC
GGAYVKLLSQTPDLNLDEFVDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGEYEEKHAK
KPDADLRTYYTDKKTHLYTLVVNPDNSFEVLVDQTVVNSGNLLTDMTPPINPAAEIEDPD
DHKPEDWDERAKIQDPDAVKPEDWDEDAPKQIPDEDAVKPDGWLDDQPEYTSDPDAVKPE
DWDEDMDGEWEAPQIPNALCETAPGCGAWQRPMIDNPNYKGKWKAPMIDNPNYQGVWKPR
KIANPDFFEDLHPFRMTPFNAVGLELWSMTSDIFFDNFFITNERHTAERWANDGWGMKKA
AEGAADPGLVNQMMTAADERPWLWVVYVLTVAVPLILIIVFFCTGKVRDHRPSKKAAAPA
AADYKKTDEPQPDVKEEEEEKAEEDQVKEEKSQPVAAAAAAEKKSDAEDSPAEEEEEEEE
EAAVNEEEEEEVATDQKQEDDVLRRSPRNTKGRKD
NT seq 1908 nt   +upstreamnt  +downstreamnt
atggagctgaatgtgaggtgtgttgtgctgctggccgtgggcctgtgctccacgctgcta
ctgaccacagtggccacccaccaggaggaggaggagcctatcatggagctggcggaagac
atgggcgtggaggatgagctggaggacctgggccttggggaggagcttctggacggggag
gtggatccagaggatacagacacaccaccgggaccgcctccagcccctaaagtgacctac
aaagctcccgagcccatgggggaacacttcttcgctgagtcttttgacagggggacctta
gacagctgggtcctgtcaaaggccaagaaggaggacattgatgaggatattgccaagtat
gatggtaaatgggaggtggaggacatgaaagacagcaagctgcccggagacaaaggcctg
gtcctcaagtcacgtgctaagcaccacgccatctcagcccagctcctcagacccttcatc
ttcgacaccaaacccctcatcgtccagtatgaggtcaacttccagcaggggatcgactgt
ggcggtgcctacgtcaaactgctctcccagaccccagaccttaacctggatgagtttgtt
gacaagactccatacaccatcatgttcggaccagacaagtgtggcgaggactacaagctg
cacttcatcttccgccacaagaacccgaagactggcgaatacgaggagaagcacgccaag
aagcctgacgcagacctgcgcacctactacaccgacaagaagacccacctttacacgctg
gtggtgaacccagacaacagctttgaggtgctggtagaccagacagtggtgaacagtggt
aacctgctgacagacatgaccccacccatcaatcctgccgccgagatcgaggaccccgat
gaccacaagccagaggactgggacgagagggccaagatccaggaccctgacgcagtcaaa
cctgaggactgggatgaggatgcaccaaaacagatcccagatgaggatgcagtgaagcca
gacggctggctggatgatcagccagagtacaccagtgaccccgatgcagtcaagcccgag
gactgggatgaggacatggatggtgagtgggaggcccctcagatccctaacgccctctgt
gagaccgcccccggctgcggtgcctggcaacgtcccatgattgacaaccccaactacaag
ggcaagtggaaggccccaatgatcgacaatcctaactaccagggtgtgtggaagcccagg
aagattgccaatccggacttcttcgaggacctccatcccttcaggatgacccccttcaac
gccgtgggcctggagctgtggtccatgaccagcgacatcttcttcgataacttcttcatc
accaacgagcggcacacggccgagcgctgggccaatgacggctggggcatgaagaaagct
gctgagggagccgctgatcccgggctggtaaaccagatgatgactgcagcagacgagcgt
ccctggttgtgggtggtctatgtgctgactgtggccgtgcccctcatcctcatcattgtc
ttcttctgcaccggaaaggtgagggaccacagaccatctaagaaggcggcggctccagct
gcagctgactacaagaagacagacgagccccagccagacgtgaaggaggaggaagaggag
aaggctgaggaggaccaagtcaaagaggagaagagccagccagtagcagcagcagcagca
gcggagaagaagagtgatgcagaggacagccctgcagaggaggaggaggaggaggaagaa
gaggcagcagtaaatgaggaagaggaagaggaggtggcaactgatcagaaacaagaagat
gatgtcctcaggaggtcccctagaaacacaaaagggagaaaggactga

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