Salvelinus namaycush (lake trout): 120048048
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Entry
120048048 CDS
T07522
Name
(RefSeq) calnexin-like isoform X1
KO
K08054
calnexin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04141
Protein processing in endoplasmic reticulum
snh04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120048048
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120048048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
snh03110
]
120048048
04131 Membrane trafficking [BR:
snh04131
]
120048048
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
snh04091
]
120048048
Chaperones and folding catalysts [BR:
snh03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
120048048
Membrane trafficking [BR:
snh04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
120048048
Autophagy
ER-phagy
Other ER-phagy associated proteins
120048048
Lectins [BR:
snh04091
]
L-type lectins
120048048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Piezo_TM1-24
Neur_chan_memb
DDHD
PFF1_TM
SID-1_RNA_chan
Motif
Other DBs
NCBI-GeneID:
120048048
NCBI-ProteinID:
XP_038849657
UniProt:
A0A8U0QUB2
LinkDB
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Position
Sna5:21842205..21865490
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AA seq
635 aa
AA seq
DB search
MELNVRCVVLLAVGLCSTLLLTTVATHQEEEEPIMELAEDMGVEDELEDLGLGEELLDGE
VDPEDTDTPPGPPPAPKVTYKAPEPMGEHFFAESFDRGTLDSWVLSKAKKEDIDEDIAKY
DGKWEVEDMKDSKLPGDKGLVLKSRAKHHAISAQLLRPFIFDTKPLIVQYEVNFQQGIDC
GGAYVKLLSQTPDLNLDEFVDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGEYEEKHAK
KPDADLRTYYTDKKTHLYTLVVNPDNSFEVLVDQTVVNSGNLLTDMTPPINPAAEIEDPD
DHKPEDWDERAKIQDPDAVKPEDWDEDAPKQIPDEDAVKPDGWLDDQPEYTSDPDAVKPE
DWDEDMDGEWEAPQIPNALCETAPGCGAWQRPMIDNPNYKGKWKAPMIDNPNYQGVWKPR
KIANPDFFEDLHPFRMTPFNAVGLELWSMTSDIFFDNFFITNERHTAERWANDGWGMKKA
AEGAADPGLVNQMMTAADERPWLWVVYVLTVAVPLILIIVFFCTGKVRDHRPSKKAAAPA
AADYKKTDEPQPDVKEEEEEKAEEDQVKEEKSQPVAAAAAAEKKSDAEDSPAEEEEEEEE
EAAVNEEEEEEVATDQKQEDDVLRRSPRNTKGRKD
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaatgtgaggtgtgttgtgctgctggccgtgggcctgtgctccacgctgcta
ctgaccacagtggccacccaccaggaggaggaggagcctatcatggagctggcggaagac
atgggcgtggaggatgagctggaggacctgggccttggggaggagcttctggacggggag
gtggatccagaggatacagacacaccaccgggaccgcctccagcccctaaagtgacctac
aaagctcccgagcccatgggggaacacttcttcgctgagtcttttgacagggggacctta
gacagctgggtcctgtcaaaggccaagaaggaggacattgatgaggatattgccaagtat
gatggtaaatgggaggtggaggacatgaaagacagcaagctgcccggagacaaaggcctg
gtcctcaagtcacgtgctaagcaccacgccatctcagcccagctcctcagacccttcatc
ttcgacaccaaacccctcatcgtccagtatgaggtcaacttccagcaggggatcgactgt
ggcggtgcctacgtcaaactgctctcccagaccccagaccttaacctggatgagtttgtt
gacaagactccatacaccatcatgttcggaccagacaagtgtggcgaggactacaagctg
cacttcatcttccgccacaagaacccgaagactggcgaatacgaggagaagcacgccaag
aagcctgacgcagacctgcgcacctactacaccgacaagaagacccacctttacacgctg
gtggtgaacccagacaacagctttgaggtgctggtagaccagacagtggtgaacagtggt
aacctgctgacagacatgaccccacccatcaatcctgccgccgagatcgaggaccccgat
gaccacaagccagaggactgggacgagagggccaagatccaggaccctgacgcagtcaaa
cctgaggactgggatgaggatgcaccaaaacagatcccagatgaggatgcagtgaagcca
gacggctggctggatgatcagccagagtacaccagtgaccccgatgcagtcaagcccgag
gactgggatgaggacatggatggtgagtgggaggcccctcagatccctaacgccctctgt
gagaccgcccccggctgcggtgcctggcaacgtcccatgattgacaaccccaactacaag
ggcaagtggaaggccccaatgatcgacaatcctaactaccagggtgtgtggaagcccagg
aagattgccaatccggacttcttcgaggacctccatcccttcaggatgacccccttcaac
gccgtgggcctggagctgtggtccatgaccagcgacatcttcttcgataacttcttcatc
accaacgagcggcacacggccgagcgctgggccaatgacggctggggcatgaagaaagct
gctgagggagccgctgatcccgggctggtaaaccagatgatgactgcagcagacgagcgt
ccctggttgtgggtggtctatgtgctgactgtggccgtgcccctcatcctcatcattgtc
ttcttctgcaccggaaaggtgagggaccacagaccatctaagaaggcggcggctccagct
gcagctgactacaagaagacagacgagccccagccagacgtgaaggaggaggaagaggag
aaggctgaggaggaccaagtcaaagaggagaagagccagccagtagcagcagcagcagca
gcggagaagaagagtgatgcagaggacagccctgcagaggaggaggaggaggaggaagaa
gaggcagcagtaaatgaggaagaggaagaggaggtggcaactgatcagaaacaagaagat
gatgtcctcaggaggtcccctagaaacacaaaagggagaaaggactga
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