Salvelinus namaycush (lake trout): 120048060
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Entry
120048060 CDS
T07522
Name
(RefSeq) protein transport protein Sec24B-like
KO
K14007
protein transport protein SEC24
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120048060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120048060
Membrane trafficking [BR:
snh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120048060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
HpaB
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
120048060
NCBI-ProteinID:
XP_038849678
UniProt:
A0A8U0UEE2
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Position
Sna5:complement(23245317..23275615)
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AA seq
1153 aa
AA seq
DB search
MSAPGFTSLKTSLDHSLNSTPNGGAAPPYQNGPGGQTYPSTYPLTGYYGAGPQQQGYPTI
PGHCAPAPQKAPITNNDHSAYCHQQPLQPNAAPTVAPSAYGATQGSHPPSLPYGTPTTLP
TSAAPPNTQHAPSFQQPAPYAQPGAYYGQQQYPTSQTQHHPQQPNLVLAPPTSPGAPLYP
IVSYPSVPGSSQYGTLRSSQAPTGPAAVPNLMGAPLHQHAPGNDTSHPASTAAVPPGYSM
APLGQPATVNGQGNAVQAPVLQHYDQSHQAPMTHDHYGGGVTHNTGGADRDIPPLGIPST
SVHSSPGHQQGGDSSSTTTGSASPVPNSYDSLEGGSYPEFSNPPSADMPKQPVYQQRPVS
RVDSSPSHGGYNQTGYQHLPQPFPNMSQLSAALGGLSGVPELEVEALRPVNLLQERNLLP
HRPLDAPEPNLSADLKKANCSPDTFRCTLTNIPQTQALLNKARLPLGLLLHPFRDLAQLP
VITSNTIVRCRSCRTYINPFVSFLDQRRWKCNLCYRVNDVPDEFMYNPVTRSYGEPHKRP
EVQNSTVEFIASSDYMLRPPQPAVYLFVLDVSHNAVEGGYLNVFCHTLLENLDKMPGDTR
TRVGFITFNSTIHFYNLQESLSQPQMLVVSDIDDLFIPTHDSLLVNLKESRALVRVLLTS
LHRMFSQTRETHSALGPALQAAYKLMSPTGGRVSVFQTQLPTLGAGLLQSREDPNQRSST
KGVQHLGPATDFYKKLALDCSGQQIGVDLFLLSSQYSDLASLACMSKFSAGSIFYYPSLH
HVHNPAQLDKFQKDLERYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLANIN
PDSGFAVQMSIEESLADTALACFQSALLYTSSKGKRRIRVHTLCLPVVSQLSDVYAGADV
QAITCLLANMAIDRSISSSLSDARDALVNAVVDSLSAYKNTVSNIQQSGLIAPAALCLFP
LYVLALLKQKALRLGTSTKLDERVFAMCEFKSQPLQQIMRAVHPDLYRLDTMSDQGALHL
NDCIVPQPHLLHLTAEKLTREGAFLMDCGSVFYLWIGKCCNDVFIRDVLGCPNHASIPPN
MTQIPELETPLSERLRALLAWLQDSRTFSSTLHVVKDDATAKTSFFQHLVEDRSESALSY
YEFLLHIQQQMSK
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgccgggttttacgagcctgaaaacctctctcgatcacagcttgaattcaacg
ccgaatggtggagcagcacccccctatcagaatggtccaggagggcagacttacccatcc
acatatcctttgactgggtactatggagccgggcctcaacagcagggctacccaaccatt
ccaggacactgtgcccctgccccccaaaaagctcccatcacgaacaatgatcacagtgct
tactgccaccagcagccactgcagcccaatgctgcacctactgtagccccctctgcatat
ggagcaacccaaggctcccaccctccctctctgccctatggcacccccaccactcttccc
acctccgctgcccctccaaacacacaacatgcaccttcattccaacaaccagccccctac
gcacagcctggggcctactatggacagcagcagtaccctacctcccaaacgcaacaccac
ccccagcagccaaacttggttttggcaccccccaccagcccaggtgctcccctgtatccc
attgtctcgtacccctctgttccgggaagcagccagtacggtacattgcgttcctcccag
gctcccaccggcccagcagctgttcccaatctgatgggcgctcccctccaccagcatgcc
ccaggaaatgacaccagtcacccagcatctactgcagcggttccccctgggtatagcatg
gctccactcggccaaccagccacagtcaacggccagggtaatgcagtccaagccccagtc
ctccagcactatgaccaaagtcaccaggcacccatgacacatgaccactacggaggagga
gtcacacacaacactgggggtgctgacagggacataccacctttaggaatcccctccact
tcagttcattcctccccagggcatcagcaaggcggggatagttcctcaaccaccaccggc
agtgcgtccccggtgcccaacagctacgactccctggaaggcggcagctacccagagttc
tccaatcctccgtctgccgacatgcccaaacagccagtctatcagcagaggccggtctcc
agggtagactcctccccctcacacggcgggtacaaccaaactggctatcagcatttgcca
cagcccttccctaacatgtcccaactgtctgcggcccttgggggactgagcggtgtacca
gagctggaggtggaggcactgcggccagtcaacctgctgcaggagaggaacctgctgccc
caccggcccctggacgcccccgaacccaacctcagcgctgacctaaagaaggccaactgc
agcccggacacgttcaggtgtaccctgaccaacatcccccagacccaggccctgctgaat
aaagcccggcttcccctaggcctgctcctgcaccccttcagagacctggcacaactccca
gtgatcacgtccaacaccatagtgagatgtcgctcctgtcgtacctacattaaccccttc
gtctccttcctggaccagaggagatggaaatgcaatctctgttacagggtcaacgatgtt
cctgatgagttcatgtataacccagtgacccgctcatatggagagccccacaagaggcca
gaggtacagaactccactgtggagttcatagcctcttcagattacatgctgcgtccccct
cagcctgcagtgtacctgtttgtgctggatgtgtctcacaacgcggtggagggaggctac
ctgaacgtcttctgtcacaccctactggaaaacctggacaagatgcctggggacacgcgc
acccgagttggcttcatcaccttcaacagcaccatccacttctacaacctccaagagagc
ctctcacagccacagatgttggtggtctccgacatcgacgatctcttcattccaacccac
gacagtctcctggtgaacctgaaggaaagcagagcgctggtgagggtactgttgacctcc
ctacacagaatgtttagccagaccagggagacccacagtgccctgggcccggcgctgcag
gctgcctacaaactcatgtcccccacggggggccgcgtctccgtgttccagacccagcta
cccacactgggcgccggcctgttgcagtcccgggaggaccccaaccagaggtccagcacc
aagggggtccaacacctgggcccagccacagacttctacaagaagctggccctggactgt
tctggccaacagataggagtggacctgttcctcctcagctcccagtactctgacctggcc
tcactagcctgtatgtctaagttctcagcgggcagtatcttctactacccctcgttgcac
cacgttcacaacccggcccagctggacaagttccagaaggatctggagcgctacctcacc
aggaagatcggcttcgaggcggttatgaggatacgctgcaccaaaggcttgtccatccac
acgttccacgggaacttctttgtgcgctcgacggacctgctgtccctggccaacatcaac
ccagactcgggcttcgccgtgcagatgtctatagaggagagcctggccgacaccgcactg
gcctgcttccagtctgcgctgctgtacacctccagcaaagggaagaggcgcatcagggtc
catactctgtgtctgccagtggtgagccagcttagtgatgtatatgccggggctgacgtt
caggccatcacctgcctcctagccaacatggccattgaccggtcgatatcgtcaagcctg
tcggatgccagggatgccctggtgaatgcggtggtggactctctgagtgcatacaagaac
actgtatctaatatccagcagtctggtctcatcgcccctgcagccctgtgtctcttcccc
ctctacgtgctggcactactcaaacagaaagcactgcgcttggggaccagcaccaagcta
gacgagcgtgtcttcgccatgtgtgagttcaagagccagccgctgcagcagatcatgcgc
gcggtccaccccgacctctaccgcctggacaccatgtcagaccagggggctctccacctg
aacgactgcatagtgccccagcctcatctgctgcacctcacggctgagaagctgaccaga
gaaggagcgttcctcatggactgtggcagcgtcttttacttgtggattgggaaatgctgt
aatgatgtgttcattcgggacgtgttgggatgcccaaaccacgcttctataccccctaac
atgacccaaattcctgagttggaaacccctctgtctgaacgactgcgtgcactcctcgcc
tggctacaggactcgagaaccttcagctcaactcttcacgtcgtgaaggacgatgctaca
gcgaagaccagctttttccagcacttggtagaggaccggtcggagtcggccctctcctac
tacgagttcctgctccacatccagcagcagatgtccaagtag
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