Salvelinus namaycush (lake trout): 120048065
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Entry
120048065 CDS
T07522
Name
(RefSeq) polycomb group RING finger protein 3-like
KO
K11488
polycomb group RING finger protein 3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120048065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120048065
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
120048065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
DUF3337
zf-RING_4
zf-Nse
TRAF3_RING
GAGA
zf-RING_10
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
120048065
NCBI-ProteinID:
XP_038849683
UniProt:
A0A8U0QUS7
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All DBs
Position
Sna5:23311129..23357417
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AA seq
249 aa
AA seq
DB search
MAALGNPETLTRKIKLWDINAHITCRLCEGYLIDATTVTECLHTFCRSCLVKYLEENNTC
PTCRIVIHQSHPLQYIGHDRTMQDIVYKLVPGLQEAEIKKQRDFYQKLGMEVPGDIKGEL
CSMKHLDPQRNGEVKTEDTDKKETAEEKPEEDNDYHRSDEQVSICLECNSSKLRDLKRKW
IRCSAQATVLHLKKFIAKKLNLTSFNELDILCNEEILGKDHTLKFVVVTRWRFKKSPLLL
HYRPKMDLL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggcggcattagggaaccctgagacactaaccaggaagatcaagttgtgggacatcaac
gcccacatcacttgtcgcctgtgtgaggggtacctgatagatgccactactgtcacggag
tgcttacacaccttctgcagaagctgtctagtgaagtaccttgaggagaacaacacctgt
cccacgtgcaggattgtcattcaccagagccatccactgcagtacatcggccatgaccga
acaatgcaagacattgtctacaagttggtgccggggttacaagaggcggagataaaaaaa
caaagagacttctatcagaagctgggaatggaagtgcccggggacatcaaaggagagctg
tgcagcatgaaacatctagatcctcaacgcaatggcgaggtgaaaacagaggacacagac
aaaaaggaaacggcggaggagaaaccggaggaggataacgattatcaccgcagcgacgag
caggtcagcatctgtttggagtgcaacagcagcaagctccgcgacctgaagcgcaagtgg
atccgctgctcggcgcaagccacagtccttcacctcaagaaattcatcgccaaaaagctt
aacctgacatcgtttaatgagctggacattttatgcaatgaggaaatcttggggaaggac
cacactttgaaatttgttgtcgtgacgagatggagatttaagaaatcccccctcctgctg
cattacaggcccaaaatggatttgctgtag
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