Salvelinus namaycush (lake trout): 120048158
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Entry
120048158 CDS
T07522
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04210
Apoptosis
snh04218
Cellular senescence
snh04620
Toll-like receptor signaling pathway
snh04621
NOD-like receptor signaling pathway
snh04622
RIG-I-like receptor signaling pathway
snh04623
Cytosolic DNA-sensing pathway
snh04625
C-type lectin receptor signaling pathway
snh04920
Adipocytokine signaling pathway
snh05132
Salmonella infection
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120048158
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120048158
04218 Cellular senescence
120048158
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120048158
04621 NOD-like receptor signaling pathway
120048158
04622 RIG-I-like receptor signaling pathway
120048158
04623 Cytosolic DNA-sensing pathway
120048158
04625 C-type lectin receptor signaling pathway
120048158
09152 Endocrine system
04920 Adipocytokine signaling pathway
120048158
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120048158
09171 Infectious disease: bacterial
05132 Salmonella infection
120048158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120048158
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
120048158
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
120048158
NCBI-ProteinID:
XP_038849831
UniProt:
A0A8U0QWB8
LinkDB
All DBs
Position
Sna5:28746579..28779181
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AA seq
913 aa
AA seq
DB search
MAEEEAYLPHPQYYDIEPIWDPLNFPPMSLTNSLRTADGPYLQIIEQPKQRGFRFRYGCE
GPSHGGLPGASSEKNRKSYPQVKICNYQGLARVVVQLVTNSKDAHLHAHSLVGKQCDKGI
CITDQQPKDSSISFPNLGILHVTKKNVSKTLEDRMTEAYRMGYNCGIVIHPEIDTIQGEV
RIPRELTDHQRSMICSAATKQAKEMDLSVVRLMFTAFLPDSDGGFSRRLDPVISDPIFDS
KAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDETGLTWEAFGDFSP
TDVHRQFAIVFKTPKYRDLNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDKEEVQRK
RQKTLPNFQDYSGQGGSGGMYRGPGGGGSATGGGPGSGGGGYFQAYSTYNNYGTGYSAGF
SPGMSGGGAGIKHATQGRAEDSGDDSDMGDDPSSGAVVADRAQSEEDASAGETKCVLEAR
LVDVAERQAEALFHYAVTGDVRYLMAPQRHLMTAQDENGDTGLHLGVIHSQTDAVRSLAQ
VLSALPGEEVLNMRNDLYQTPLHLAVITQQKEAAEALVLAGADVTLSDRHGNTALHLATQ
QKEGGMVGFLLRHREVVELVDLPNTAGFCSLHLAVLANSLCSLRDLLVSGGNVEVQERSC
GRTALHLATELDNVSLAGCLLLEGNADVDCCTYNGSSPLHIAAGRGSVKLTALLMAAGAN
PHKENFEPLFFREDDCCVDEEEEQDEGYIPGMTPLNMAATAEVLEILNGKEYKPETTIPV
FIPPQGDMRSLGSDTKRALCQALECQGGSWESLANTLGLGILNSAFRLSPSPASTLLDSY
EVSGGMVMDLLEGLRMVDNSTALTVLQGALCETEQAPLAPQSTTELLGRVPDLKLDGQED
SGVCDSGVELSTA
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaggaggcttacctgcctcacccacagtactatgacatagagccaatatgg
gatcctctgaatttccctcccatgtcactcaccaactcactccggacagcagatggaccc
tacctccaaatcattgaacagcctaaacagcggggcttcaggttccgttatggctgtgag
gggccctctcacggtgggctcccaggggcctccagcgagaagaacaggaagtcatatccc
caggtcaagatctgtaactaccaggggttggcacgtgtggtggtacagctggtgaccaac
tctaaagatgcccacctccatgcccacagtttggtgggcaagcagtgtgacaaaggcatc
tgcatcacagaccaacagcccaaagactccagcatcagtttccccaacctaggcatcctc
cacgtgaccaagaagaatgtgagtaagacactggaggaccgcatgactgaggcctacagg
atgggttacaactgtggcattgtcatccaccccgagatagacaccatccagggagaggtt
cgcatcccccgggagctcactgatcaccagagaagcatgatctgcagtgcagcaaccaag
caggctaaagagatggacctaagcgtggtgcgcctcatgttcacagccttcctcccagat
agtgacgggggcttctcccgtagactggaccccgtcatatcagaccccattttcgacagc
aaagctcctaatgcatccaacctgaagattgtgcggatggaccgcacagctggctgtgtg
acaggaggagaagaggtctacctgctctgtgacaaggtccagaaagatgacatccaggta
cgcttctatgaggatgacgagaccgggctgacatgggaggcctttggggacttctccccc
actgatgtgcatcgacagtttgccattgttttcaagacccccaaatacagagacctgaac
ctccagaagcccacctcagtgtttgtgcagctgaagcgtaaatcggacaacgagacgagc
gagcccaagcccttcacctaccacccacagatcatagataaggaagaggtgcagaggaag
agacagaagaccctgcctaatttccaggactacagcggccaaggtggatcagggggcatg
taccggggaccagggggaggaggctccgctacggggggaggacccggctcaggtggagga
ggttacttccaggcctattccacctacaataactacggcaccggctatagcgctggcttt
tcccctggcatgagtggtggcggggcgggcattaaacatgctacacagggcagagcggag
gacagcggtgatgacagcgacatgggcgatgacccgtcctcgggggcagtggtggcggac
cgagcccagtcggaggaggatgcctctgctggggagacaaaatgcgtgctggaggccagg
ctggtggatgtggctgagaggcaggctgaagccctcttccattacgccgtcactggagac
gtccgctacctgatggctccacagcgccacctcatgacggctcaggacgagaacggcgac
actggtctccatctgggggtgatccacagccagacagacgctgtcaggagtctagcccag
gtgctctctgccctgcctggagaggaggtcctcaacatgaggaatgacctctaccagact
cctttgcacctagcggtgataacccagcagaaggaggcagccgaggccctcgtattggct
ggggctgatgtcactctgtctgatcgccacggaaacacggctctacacctggccactcag
cagaaggagggagggatggtgggatttctactaagacacagagaggtggtggaactagtg
gacctccccaacacagcaggattttgctccctccacctggctgtgctggccaacagccta
tgttccctcagggacctcctggtgagcgggggcaatgtggaggtccaggagaggagctgc
ggccgcacggcactccacctggccactgagctggacaacgtctccctggcaggctgcctg
ctactggaggggaatgctgatgtggactgttgcacctacaacggctccagccctctccac
atagcagcaggccggggctctgtcaaactgaccgctctcctcatggctgcaggtgccaat
cctcacaaagaaaactttgagcccctgttcttcagagaggatgactgctgtgtggatgag
gaagaggaacaggatgaaggctacatcccagggatgactcctcttaacatggctgccact
gctgaggtattggaaattctgaatggcaaagagtacaagccagagaccaccatcccagtc
ttcatcccccctcaaggcgacatgcggagcctgggctcagacacaaagcgggcattatgc
caggcccttgagtgccagggggggagctgggagagcctggcaaacacgctggggctgggc
atcctcaacagtgccttcagactcagcccctcccccgccagcacactgctggacagctac
gaggtgtccgggggaatggtcatggaccttttggagggactcaggatggtggataactcc
accgcgttgacagtactgcagggggcactgtgtgaaacagagcaggctcctctagctccc
caaagcaccacagagctcttaggacgtgtcccggatctgaagctggacggacaggaggac
agcggcgtgtgtgacagtggggtggagctctccacagcgtga
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