Salvelinus namaycush (lake trout): 120048194
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Entry
120048194 CDS
T07522
Symbol
cd74a
Name
(RefSeq) CD74 molecule, major histocompatibility complex, class II invariant chain a isoform X1
KO
K06505
CD74 antigen
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120048194 (cd74a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
snh04090
]
120048194 (cd74a)
00535 Proteoglycans [BR:
snh00535
]
120048194 (cd74a)
CD molecules [BR:
snh04090
]
Proteins
120048194 (cd74a)
Proteoglycans [BR:
snh00535
]
Cell surface proteoglycans
Others
120048194 (cd74a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC2-interact
Thyroglobulin_1
MHCassoc_trimer
Motif
Other DBs
NCBI-GeneID:
120048194
NCBI-ProteinID:
XP_038849888
UniProt:
A0A8U0UEL3
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All DBs
Position
Sna5:complement(31231730..31236310)
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AA seq
275 aa
AA seq
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MEEQHDDALLERTGSQDVILPMTATRGASNSRPLKIAGFTVLACLLLAGQAFTAYLVFNQ
RGQIHDMEKSNDNMRKQLRNRPPAVAPVQMHMPMLSMPRLIDFTDEDVKAPMTKLEATAI
VSLEKQVKDLLQNPQLPQFNETFLANLQSLKRQMEEAEWKGFETWARNWLLFQMAQEKPP
APTTTPQPAAGLQTKCNLEKSSQSRKLGAYLPQCDEQGNYLPMQCWHATGFCWCVDRNGK
VIEGTSIRGRATCDRVPSRMAAFPRMMQLKEYKDE
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcaacatgatgatgcgctcctggagcgcacagggagccaggacgtgatccta
ccaatgacagctacaagaggggcttctaacagccgtccgttgaagatagcagggttcaca
gtgttggcctgtcttctcttggccggccaggccttcactgcctacttggtcttcaaccag
aggggccagatccacgacatggagaagagcaatgacaacatgcgcaagcagctgagaaac
agacctccagcagtagcccctgtccagatgcacatgcccatgctcagcatgccgcggctg
atagacttcactgatgaggacgtaaaggctcccatgacgaaattggaggccactgccatt
gttagcctagagaagcaggtgaaggatctgctgcagaacccccagctgccccagttcaac
gagacgttcctggccaacctgcagagcctgaagagacagatggaggaggccgagtggaag
ggttttgagacttgggcacgtaattggctgctcttccagatggcccaggagaagccccct
gcacccaccaccacacctcagcctgccgccggcctgcagaccaagtgtaacctggagaag
tcgtcccaaagccgtaagcttggtgcctacctccctcagtgtgacgagcagggcaactac
ctgcccatgcagtgctggcacgccactggtttctgctggtgtgtggacaggaacggcaaa
gtcatcgagggcaccagcatacgcggcagagccacctgtgacagagtccccagtcggatg
gcggctttccccaggatgatgcagctgaaggagtacaaggatgagtaa
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