Salvelinus namaycush (lake trout): 120048239
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Entry
120048239 CDS
T07522
Name
(RefSeq) synaptic functional regulator FMR1-like isoform X1
KO
K15516
fragile X mental retardation protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120048239
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120048239
Factors involved in mRNA localization
Other mRNA localization factors
120048239
mRNA cycle factors
Stress granule specific factors
120048239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXMR_C2
Tudor_FRX1
KH_1
Agenet
KH-I_KHDC4-BBP
DUF7636
Motif
Other DBs
NCBI-GeneID:
120048239
NCBI-ProteinID:
XP_038849970
UniProt:
A0A8U0QV04
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Position
Sna5:complement(35288569..35298682)
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AA seq
592 aa
AA seq
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MDELAVEVRGTSGAFYKGYLKDVHESAVTVSFENNWQPERQIPFHDVRFPPPTGFQKEIN
ESDEVEVCAVYSRANDKEPCGWWLAKVRMVKGEFYVIEYAACDATLNEIVTLERLRPVNP
NKTATKNSFLKIQLDVPEDLLQMCSKDSHKDFKKAVGAFNVTYDSDKRQLVILSVNEITT
KRAQMLSDMHFRSLRTKLSLMQRNEEASRQLESSRQLASRFHEQFVVRDDLMGLAIGTHG
ANIQQARKVPGVTTIDLDEETCTFHIYGEDQEAVRKARSFLEFSEDVIKVPRNLVGKVIG
KNGKLIQEVVDKSGVVRVRIEAENDKKPPPVDEGMVPFVFVGTKESISNAKVLLDYHLNY
LKEVDQLRMERLQIDEQLRQIGGGGPRAPGTGRPDNKIFIVDNGGLGMMSMGSQRGGKPF
SRGGGGRGRRGGPSFTSGTNSEASNASETESDHKDELSDWSLAPTDELTGGFPKRPDTRK
RGGGGLRGRGGRGRGGGGFKAEDIQWTESRSRNTRDPKLRPQEDSLQIRVDSNNERSVHA
AARGPPGPAGDGIVLGANRQRPIKERPIKKEKQEGPSGESTAVPPVVVNGVS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctagctgttgaagtcagggggacgagtggggctttttacaagggatatttg
aaggatgttcatgaaagtgctgtcacagtgtcctttgaaaacaattggcagccagaacgt
caaattcccttccatgatgttcgatttcctccacccacaggttttcagaaagagataaac
gagagtgatgaagttgaggtatgtgctgtttattctagggctaatgataaagaaccatgt
gggtggtggctggcgaaggtccggatggtgaagggagagttttatgtcatagagtatgca
gcttgtgatgccacgctcaatgaaatagtcacattagagaggttacggcctgtcaaccca
aacaagacagctacaaaaaactccttcctgaaaattcaactagacgtcccagaggacttg
ctgcaaatgtgttcgaaagactctcataaagattttaagaaggcagtgggagcattcaat
gtcacttatgactcagacaaaagacagcttgttattctgtctgtgaatgagattacaacc
aaaagggcgcagatgctgagcgacatgcatttccggagcctgcgcaccaagctgtcccta
atgcagaggaacgaggaggctagccgccaactggagagctctcggcagctggcatctagg
ttccatgagcagtttgtggtccgagatgacctgatggggctggccatcgggactcatggt
gccaacatccagcaggccaggaaagtacctggggtcaccaccatagacctggacgaagag
acctgcactttccacatctatggcgaggatcaagaggcagtgcgcaaggctaggagcttc
ttggaattttctgaagatgtcatcaaagtaccaaggaatttagtggggaaagtcattggg
aaaaatgggaagttgatccaggaagtagtggataaatctggtgtcgttcgagttcggatt
gaggctgagaacgacaagaagccacctccagtggatgagggcatggtgccgtttgtcttt
gtgggtacaaaggaaagcatttccaatgctaaagtactgttagactatcatctcaactat
ctgaaggaagtggaccagctgcgcatggagcggctgcagatagatgagcagctgaggcag
attgggggaggaggccccagggccccggggactggacggcctgacaacaagatcttcatt
gtagacaacggtggcctgggcatgatgagcatgggctcccagagaggagggaagccgttc
agcaggggaggaggcggccgtggccgacgcggtggtccctcttttacctccggcaccaac
tctgaggcttccaatgcgtctgagaccgagtcggaccacaaggacgagctgagcgactgg
tctctggcccccactgacgagctgacagggggtttccccaaacgacccgatacacgcaag
agagggggaggagggcttcgcggacggggagggagaggaagaggagggggaggcttcaaa
gctgaagacatccagtggactgagtcacgttcacggaataccagagaccctaagctaagg
cctcaggaagattctttgcagatccgagtggacagtaacaatgagaggagtgtgcatgct
gcagccagaggtccccctggccccgcaggcgacggaattgtcctcggagcaaaccgacag
agacccatcaaagagcgacctatcaagaaggagaagcaggagggccctagtggtgaatcc
accgctgtgcccccggtggtggtgaacggggtgtcgtag
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