Salvelinus namaycush (lake trout): 120048250
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Entry
120048250 CDS
T07522
Name
(RefSeq) hepatoma-derived growth factor-related protein 2-like isoform X1
KO
K03145
transcription elongation factor S-II
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120048250
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
120048250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
120048250
NCBI-ProteinID:
XP_038849995
UniProt:
A0A8U0UEQ3
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All DBs
Position
Sna5:complement(38632698..38664370)
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AA seq
734 aa
AA seq
DB search
MTREEELIRIAKKLDKMVSRNNTEGALDLLNELKSFNMTLKLLQETRIGMSVNGIRKHCT
DDEVVSLAKILIKDWKRLLDAARTQSTERPNEMKNGVDSNKSTASPVRSPLEKDTSHKRL
DVSDSDPESEKEEYSDKRQKEKHNVEHKKDERAVDLKKERNTEAFKNKRHAEQSKNGKHT
EDARKERHVEHLEEPKKERHFEKSRKERHVPIHETKNERHVQEPKKKSNLEEPKNESHTD
EPRRERFADELRKERHTEERRKEIPMYEPRQERPVENHRQGFERRDSSDTLSPSHPRPTP
PSRRSSVKGKEERKKDPPDPNSPLPPLHPHPSMPTAAEVKKERKEPLRISVVRKEPLDPN
APFAPLPLHLHPPPHVKRPSVEVKKEREESSDYKPVSLKVTSSDHVKKDRKDSDSKVPKK
TSVDAKKERKDLSDSKPKPAKRQSLDSSDSNPKRSKRPSLDGKKDRKDSTDSKPSHSVKR
HSTDSKSDRRDSVDSKTSNSPSAKKLSSETKEFHGSKSSHPGPLQRKSSTDSIERRGKPE
MPKIPSTPTSPMSPSFSSAGVPLSPCLATGETIRDKCIEMLAAALRTDDNFKEFGTNCDS
MAAEIEDHIYTEMGSTDMKYKNRVRSRISNLKDPKNPGLRRNVLAGGIELRCFAIMSAEE
MASDELKQLRNNLTKEAIREHQLSKTSGTISDLFQCSKCNKKNCTYNQMQTRSADEPMTT
FVLCNECGNRWKFC
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgagaagaggagttaattcggattgcaaaaaagctggacaagatggtgtctaga
aataacacggagggtgccctggacctgctgaatgaactgaagagcttcaacatgacgctg
aaacttctgcaggaaacgaggatcggcatgtctgtgaatggaatcaggaagcactgcaca
gacgacgaggtcgtttccctggccaagatcctcatcaaggactggaagagactgctggat
gctgcacgtactcagagtactgagaggcccaatgagatgaagaatggggttgactccaac
aaatccacagcgtctccagtcaggtcccccttagagaaagacaccagtcacaagaggctg
gatgtttctgattcagatcctgaatctgaaaaggaagaatactctgacaaacggcaaaaa
gagaagcacaatgttgaacacaaaaaagatgagagagctgttgacctaaaaaaggagcga
aataccgaggcattcaaaaacaaacggcatgcagaacaatccaaaaatggaaaacataca
gaagatgccagaaaagaaagacatgtagaacacttagaagaacccaaaaaggagagacac
ttcgaaaaatccagaaaagaaagacatgtacctatacatgaaacaaaaaatgaaagacat
gtgcaagaacccaagaaaaaaagtaatctcgaagaacccaaaaatgagagccacacagac
gaacccagaagggagcgtttcgcagatgaactgagaaaggaaagacacacagaggaacgc
agaaaggagataccaatgtacgaaccccgacaagagagacctgttgaaaaccacagacaa
gggtttgagaggagagattcttcagacactctgtctccttctcatcctcgtcccacccct
ccgtccagacgttcctcagtgaaggggaaggaagagaggaaaaaagatcctcctgaccct
aattccccgcttcctcctcttcatcctcatccttctatgcccactgcagcagaggtcaag
aaggagagaaaagagcctctgcggatttctgtggttcgaaaagagcctctggaccccaat
gctccatttgctcctcttcctctccatctccatcctcctcctcatgtgaagcgcccgtca
gtggaagtcaaaaaggagagagaagagtcgtcagattacaaacccgtttctctgaaggtg
acgtcctctgaccatgtgaaaaaagatagaaaagactccgatagcaaagtgcccaaaaaa
acatctgttgatgccaagaaagaaagaaaggatttgtcagattccaaaccaaaacctgct
aaaaggcagagtctggactcctcagattccaatccaaaacgttctaaaaggccaagtctg
gatggcaagaaagacagaaaggactccactgactcgaagcccagccattctgtgaaacgt
cattcgactgactccaaatcagacaggagggactctgtggattccaagactagcaactca
ccctcagctaagaagctctctagcgagacgaaagaatttcatggctccaagtcctctcac
cctggccctctgcagagaaagtcctcaacggacagtattgaacggagagggaaaccagag
atgccaaagatcccctccacccccaccagtcccatgtccccctccttcagctcagcaggg
gttcccctgtccccttgccttgccactggagaaaccatcagggacaagtgcatcgagatg
ctggctgctgctctacgtacagatgacaacttcaaagaatttgggacaaactgtgactcc
atggcagcagagattgaagatcatatttacacagagatgggatccacagatatgaagtat
aaaaacagggtgcggagccgcatcagcaacctgaaggaccccaaaaaccctggactgcgg
aggaacgtcctggctggaggcatcgagctgagatgcttcgccatcatgtctgctgaggag
atggctagtgatgagctgaagcagctcaggaacaatctgactaaggaggccattagggaa
caccagctgtccaaaaccagcggtaccatttctgacctgtttcagtgcagcaagtgcaac
aaaaagaactgcacctacaaccagatgcagacccgcagcgctgatgagcctatgactact
tttgttctgtgtaacgagtgcgggaaccgctggaagttctgctga
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