Salvelinus namaycush (lake trout): 120048313
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Entry
120048313 CDS
T07522
Name
(RefSeq) replication protein A 32 kDa subunit-like isoform X1
KO
K10739
replication factor A2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03030
DNA replication
snh03420
Nucleotide excision repair
snh03430
Mismatch repair
snh03440
Homologous recombination
snh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120048313
03420 Nucleotide excision repair
120048313
03430 Mismatch repair
120048313
03440 Homologous recombination
120048313
03460 Fanconi anemia pathway
120048313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snh03032
]
120048313
03400 DNA repair and recombination proteins [BR:
snh03400
]
120048313
DNA replication proteins [BR:
snh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
120048313
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
120048313
MMR (mismatch excision repair)
120048313
DSBR (double strand breaks repair)
HR (homologous recombination)
120048313
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
HVO_2525_N
LexA_DNA_bind
Motif
Other DBs
NCBI-GeneID:
120048313
NCBI-ProteinID:
XP_038850111
UniProt:
A0A8U0UFP3
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Position
Sna5:complement(43498555..43506535)
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AA seq
278 aa
AA seq
DB search
MWNQGGSYGESNMGGGYTQSPGGFASPAASQGGEKKGRQRAQHIIPCTVSQLMSAAQTED
VFRVGEVEVAQVTIVGIIRTTDKSMTNIQYKVDDMTGAPMDVKQWVDTEDSSVDSTVIPP
GTYVKVSGNLRSFQNHRSVVAFSVRPLEDMNEITSHMLEVVQAHVLLSKPQTIMLGGGGG
MNTSMVPLSRPGMGGNMGGGYSGANDMSANGLSPSQNQVLSLIRSCADAQGISTQDLKQR
LSGMSLAVIKHAVEFLSNEGHIFSTIDEDHFKSTDNDD
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaccaaggtggatcatacggtgaatcaaacatgggtggtggatacactcagtcc
ccgggaggattcgcatcacctgctgcctcccagggaggagagaagaaagggagacaacgt
gcccaacatattatcccctgcacagtgtcccagctcatgtctgctgcccaaacagaggat
gtcttcagagtgggagaggtagaggttgcccaggttaccattgtgggcatcatcagaacc
actgacaaatccatgaccaacatccagtacaaagtcgatgacatgacaggggcccctatg
gacgtgaagcagtgggtagatacggaggattccagtgtggacagcactgtcattccccca
ggcacttacgtcaaggtctctggcaatttgcgctccttccagaaccacaggtccgtggta
gcgttcagtgtccggcccctagaggacatgaacgagatcacctcccacatgctggaggtg
gtgcaggcacatgtgctgctcagcaaaccacagactattatgttgggcggaggaggggga
atgaacactagcatggtgcccttgtcgaggccgggaatgggtggcaacatgggaggtgga
tactcgggtgccaacgacatgtccgctaacggcctgagcccaagccagaaccaggtgctg
agcttgataaggagctgtgcagacgcacagggtatcagcacacaggacttgaagcagaga
ctcagcggcatgagcttggctgtcatcaagcatgcagtggagttcctcagcaacgaagga
cacatcttctccaccatcgacgaagatcacttcaagtctacggacaatgacgactaa
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