KEGG   Salvelinus namaycush (lake trout): 120048313
Entry
120048313         CDS       T07522                                 
Name
(RefSeq) replication protein A 32 kDa subunit-like isoform X1
  KO
K10739  replication factor A2
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03030  DNA replication
snh03420  Nucleotide excision repair
snh03430  Mismatch repair
snh03440  Homologous recombination
snh03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120048313
   03420 Nucleotide excision repair
    120048313
   03430 Mismatch repair
    120048313
   03440 Homologous recombination
    120048313
   03460 Fanconi anemia pathway
    120048313
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:snh03032]
    120048313
   03400 DNA repair and recombination proteins [BR:snh03400]
    120048313
DNA replication proteins [BR:snh03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    120048313
DNA repair and recombination proteins [BR:snh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     120048313
   MMR (mismatch excision repair)
     120048313
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     120048313
SSDB
Motif
Pfam: RPA_C tRNA_anti-codon HVO_2525_N LexA_DNA_bind
Other DBs
NCBI-GeneID: 120048313
NCBI-ProteinID: XP_038850111
UniProt: A0A8U0UFP3
LinkDB
Position
Sna5:complement(43498555..43506535)
AA seq 278 aa
MWNQGGSYGESNMGGGYTQSPGGFASPAASQGGEKKGRQRAQHIIPCTVSQLMSAAQTED
VFRVGEVEVAQVTIVGIIRTTDKSMTNIQYKVDDMTGAPMDVKQWVDTEDSSVDSTVIPP
GTYVKVSGNLRSFQNHRSVVAFSVRPLEDMNEITSHMLEVVQAHVLLSKPQTIMLGGGGG
MNTSMVPLSRPGMGGNMGGGYSGANDMSANGLSPSQNQVLSLIRSCADAQGISTQDLKQR
LSGMSLAVIKHAVEFLSNEGHIFSTIDEDHFKSTDNDD
NT seq 837 nt   +upstreamnt  +downstreamnt
atgtggaaccaaggtggatcatacggtgaatcaaacatgggtggtggatacactcagtcc
ccgggaggattcgcatcacctgctgcctcccagggaggagagaagaaagggagacaacgt
gcccaacatattatcccctgcacagtgtcccagctcatgtctgctgcccaaacagaggat
gtcttcagagtgggagaggtagaggttgcccaggttaccattgtgggcatcatcagaacc
actgacaaatccatgaccaacatccagtacaaagtcgatgacatgacaggggcccctatg
gacgtgaagcagtgggtagatacggaggattccagtgtggacagcactgtcattccccca
ggcacttacgtcaaggtctctggcaatttgcgctccttccagaaccacaggtccgtggta
gcgttcagtgtccggcccctagaggacatgaacgagatcacctcccacatgctggaggtg
gtgcaggcacatgtgctgctcagcaaaccacagactattatgttgggcggaggaggggga
atgaacactagcatggtgcccttgtcgaggccgggaatgggtggcaacatgggaggtgga
tactcgggtgccaacgacatgtccgctaacggcctgagcccaagccagaaccaggtgctg
agcttgataaggagctgtgcagacgcacagggtatcagcacacaggacttgaagcagaga
ctcagcggcatgagcttggctgtcatcaagcatgcagtggagttcctcagcaacgaagga
cacatcttctccaccatcgacgaagatcacttcaagtctacggacaatgacgactaa

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