Salvelinus namaycush (lake trout): 120048322
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Entry
120048322 CDS
T07522
Name
(RefSeq) thyroid hormone receptor-associated protein 3-like isoform X1
KO
K13112
thyroid hormone receptor-associated protein 3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120048322
Spliceosome [BR:
snh03041
]
Complex B
Other components
Complex B specific factors
120048322
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Paralog
Gene cluster
GFIT
Motif
Pfam:
THRAP3_BCLAF1
Motif
Other DBs
NCBI-GeneID:
120048322
NCBI-ProteinID:
XP_038850131
UniProt:
A0A8U0QWZ7
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Position
Sna5:complement(44579112..44606915)
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AA seq
971 aa
AA seq
DB search
MSKATKSASKSRSHSRSRSSSRSRSRKHRYSSRSRTRSRSRSHSPSHNNRERNYPREYQN
NNREFRGYHRGFRRPYYFRGRGSGYFPRGRFQRGGGGGYNNYRPNNWQNYRQHPQQQQHP
QQQQQQQQQQQQQQPHSPRRGRSRTPKKRSGSPHSHSHSKYSDRSSSPRSRRSHHSSSSH
SSSPTRRSGSGSATQNSKDVKEERSASKEVQKKGGGGGGHGEPVENTGGSAGPDGGDSGD
KPKANWQGVTDHSNSPKGSSPQVRSAVIIGQGAPASTQSSPSPKSTNANGPNYNGAPSWQ
IQTVGSSPSTKSPSQKSPTPVFSGFGFFSKDNLAGDKAAISSVFKRFLEEHNHKKKQSGW
ENGREMETNGGDVEREKGNGMKASGGIFDREPDKGENEKYREDFDDDGNVSLNHFLKASP
FFSCDGEEEELIPKPRPKVLRKEHDREDDESPKPKSKVTLSARELFEERFGKWEDLANLQ
VAAKYDDLDAMAEEIYRSRKQEKAAAIAAALAKREAIAGMLRGFSPENVSKDRRKEKAAS
SLSPTPAPWRNSDREMFVVRGEDSPPRASEKRGAEFSVRMDSLRDDMASSSGFMVGERRS
SRDLVHPTKKEQEFRSVFQHIQSTQLQRSPSELFAQHIVTIVHYIKAQHFPSNGMTLNER
FAMYQRRAAQKEMMKPRKSPEIHRIIDVSLSAFKKHSHLFERMKNSGDGSYKDEGKKIKG
DSMDLRLDIERRKKYSTRERDYKQDGGRDSGDSPDASMDRSAEKSSKHHKKSNSSSRKNK
KKQSRSRSSSSSAKSHRGGDYTHKEPELKDEGFNKARLGPRGDYGGPTERGRGRGGFQFR
IRGRGWNRENDQGNNANGNPPNMAIPVHPKNEDLDPEYTPKSRKYYLHDVREGERKWVDN
RGRGNFLRGSRGRFIIRKASVGPPNNKSSPKWTHDKFQVNGGEEEGEPQEEVMEQDHKDQ
EKSEDIENTEQ
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaggcaacgaagtcagcctccaagtctcggtcccactcccgctccagaagcagc
tcacgatccagatctcggaaacatcgctacagctctaggtcccgcactcgctcgcgctcc
agatctcattctccatcccacaataaccgagaacggaactacccaagggagtaccagaat
aataaccgcgagttccggggctaccaccgaggcttccggaggccctactacttcagaggc
cgagggagtggctacttcccacgggggcgcttccagaggggtgggggaggcggctataac
aactaccgccccaataactggcagaactacaggcagcacccccaacagcagcagcacccc
caacagcagcagcagcagcaacaacagcagcagcagcaacaaccccacagcccgagacgg
ggacgatcccgtacccctaaaaagcgctctggtagccctcattcccacagccactccaag
tactcggaccgctcttcctcgccccgatcccggcgttcccaccactcctcttcctcacat
tcctcctctcccacacgcaggtcgggctctgggtcggctacgcagaactctaaggatgtc
aaggaggagcgttctgcctccaaggaggtccagaagaaaggaggaggaggaggaggacat
ggtgagcccgtggagaacacaggggggtctgcagggcctgatgggggcgacagtggggac
aagcccaaggctaactggcagggcgtgacggatcacagcaacagccccaaggggtcaagt
cctcaggtgcgctcagctgttatcattggtcagggcgctccagcttcgacccagtctagt
ccctctcctaaaagcactaatgctaatggccccaattacaatggtgccccctcatggcag
atacagacggtgggcagttcaccttccaccaaaagcccttctcagaaaagccccacacct
gtgttctctggctttggcttcttctctaaagacaacctggcaggggataaagcagctatc
tcttcagtgttcaaaaggttcttggaagagcacaatcataagaaaaagcagtccggttgg
gagaatggcagagagatggaaaccaatggtggggatgtggagcgggagaaagggaatggc
atgaaggcctctgggggcatctttgacagagagcccgacaaaggggagaatgagaagtac
agggaagactttgacgatgatgggaatgtgtcgttgaaccacttcttgaaagcctcccct
ttcttttcctgcgatggcgaggaagaggagttgatacccaagccccgtcccaaggtgctc
cgcaaagagcatgaccgggaggacgacgagtcgcccaagcccaagagcaaagtcaccctc
tcggcccgcgagctatttgaggagcgcttcggcaagtgggaggacctggccaacttgcag
gtggctgccaaatatgatgatcttgatgccatggcggaggagatttaccgcagccggaag
caggagaaggctgcggccatagctgcggccctggccaagagagaggccattgcgggcatg
ctcagaggcttctccccggagaacgtcagcaaagacaggaggaaggagaaagctgcctcc
agcctgtcccccacacccgcaccatggaggaactctgaccgagagatgttcgtggtcagg
ggggaggactctcccccaagggcctctgagaaaagaggagcggagttcagtgtcagaatg
gattctctcagagatgacatggcaagctcctctggctttatggttggtgagcgaaggtca
tcacgggatcttgtgcatcctactaaaaaggagcaggagtttcgctctgtcttccagcac
attcagtccacacagttacaaaggagtccctcagagctgtttgcacagcacattgtcacc
attgtccactacataaaagcacagcactttccatccaacggaatgactctaaatgagcga
tttgccatgtaccaaagaagagctgcacaaaaggaaatgatgaagccaagaaagagcccc
gagatacacaggataattgatgtttctctcagtgcttttaagaaacactctcacctgttt
gagaggatgaaaaactccggggatggcagttacaaggacgaaggtaaaaaaattaagggt
gactcaatggaccttcgtctggatattgagcggcgtaaaaaatattccacccgggagaga
gattataaacaggatggggggagagattcaggagactccccagacgctagcatggatagg
tccgctgagaaatcctccaagcaccacaagaagtccaactcttcctccaggaaaaacaag
aagaagcaatctcgctctcgctcctcctcttcatctgccaaatctcacaggggaggagac
tatacccacaaggagcctgagctcaaagacgagggctttaacaaggccaggctggggcct
cggggggactatggcggccccacggagaggggacgaggacgcggaggctttcaatttaga
ataagaggaaggggctggaacagggaaaatgaccagggaaacaatgctaacggtaatccc
cctaacatggccataccagttcaccccaagaatgaggacttggacccagagtacaccccc
aagagccgaaaatactacttgcatgatgtcagggagggcgagaggaagtgggtggacaac
cgaggacgggggaacttcctgcgtggcagcaggggccgtttcattatccggaaggccagc
gttggcccacccaacaacaaaagcagccccaagtggacacatgacaagttccaggtcaac
gggggggaggaggagggcgagccccaggaggaggtaatggagcaggaccacaaagaccag
gagaagtctgaagacattgaaaacactgagcagtga
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