Salvelinus namaycush (lake trout): 120048344
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Entry
120048344 CDS
T07522
Name
(RefSeq) protein argonaute-1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120048344
03036 Chromosome and associated proteins [BR:
snh03036
]
120048344
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120048344
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
120048344
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
120048344
microRNA pathway
RISC loading complex
120048344
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
120048344
NCBI-ProteinID:
XP_038850165
UniProt:
A0A8U0QVE1
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All DBs
Position
5:46247458..46267047
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AA seq
923 aa
AA seq
DB search
MTPLSGRHPMPPRSAHRHMPMPPLSAHHMPVLTFLSSLLHLFNLPYPHPYRFCPCLNFRH
PFPKLPMSTTAPPVPMGPFPPPLQQVFQAPRRPGMGTVGKPIKLLANYFEVEIPKMDVFH
YEVDIKPDKCPRRVNREVVEYMVQHFKPQLFGDRKPVYDGKKNIYTVLALSIGSEKVDFE
VTIPGEGKDRIFKVSIRFLATVSWRLLQETLVSGRLQVPLDSVQALDVAMRHLASMRYTP
VGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCE
VLDIRNIDEQPKTLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPL
QLESGQTVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKL
TDNQTSTMIKATARSAPDRQEEISRLMKNANFNLDPYIQEFGIKVKDEMAEVTGRVLPAP
ILQYGGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRK
ISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVG
DTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQEPVIFLGA
DVTHPPAGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKS
TRFKPTRIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLF
CADKSERIGKSGNIPAGTTVDTSITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTA
DELQILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHVSGQSNG
RDPQALAKAVQIHHDTLRTMYFA
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgacccctctctctggccgtcatccaatgccccctcgctctgcccatcgtcacatgccc
atgccccctctctctgcccatcacatgcccgtgctcacttttctttcctcattactccat
ttatttaatctcccatacccacatccctaccgtttctgcccttgcctaaacttccgacac
cctttccctaaattgcccatgtctaccactgcccctccagtgcccatggggcccttcccc
ccacctctgcagcaggtgttccaggcaccccgccggcctggcatgggcactgtgggcaag
cccatcaagctgctggccaactactttgaggtggagatccccaagatggacgtgttccac
tacgaggtggacatcaagcctgacaagtgcccccgacgggtcaacagggaagtggtggaa
tacatggtgcagcacttcaagccccagctctttggcgacaggaagccagtgtacgacggc
aagaagaatatctatacggtgctagcgctttctatcggaagtgagaaggtggactttgag
gtaactatccctggggaggggaaggatcgtatcttcaaggtgtctatccgctttctggcc
acggtgtcatggcgtctgctccaggagacgctggtcagcgggcgcctgcaggtacccctg
gactctgtccaagccctggatgtggccatgcgccacctagcctccatgaggtacactccg
gtaggacgatcatttttctccccacctgaaggatactaccatcccctgggtggggggagg
gaagtgtggtttggtttccaccagtctgtacgccccgccatgtggaagatgatgctcaat
attgatgtgtcggccacggccttctacaaagcccagccggtgatcgagttcatgtgcgaa
gtcctggacatccgcaacattgacgagcagcccaagaccctgaccgactcgcagagggtc
cgcttcaccaaggagatcaaaggtctgaaggtggaggtgacccactgcggtcagatgaag
aggaagtaccgcgtctgcaacgtcacgcgacgccccgccagccaccagacgtttcccctg
cagcttgagagcggacagacagtagaatgtacggtggcccagtacttcaagcagaagtac
aatctgcagctcaaatatccccacctgccctgcctccaggttggtcaggagcagaagcac
acctacctgcccctggaggtgtgtaacatagtagcagggcagcgctgcatcaagaaactg
acagataatcagacgtccactatgatcaaagccacggctcgctctgcacctgacagacag
gaggagatcagccggctgatgaaaaatgccaactttaacctggacccgtacatccaggag
tttgggatcaaggtgaaggatgagatggcggaggtgacgggaagggtgctgcctgccccc
atcctacagtatggaggacggaaccgggccatcgccacgcccaaccagggggtgtgggac
atgaggggaaagcagttctacaacggtattgagatcaaggtgtgggccatcgcctgcttc
gccccccagaaacagtgtcgggaggaggtgctcaagaacttcacagaccagctgcgtaag
atctccaaggatgctgggatgcccatccagggccagccgtgtttctgtaaatacgcccag
ggagccgacagtgtggagcccatgttcaggcacctgaagaacacctactctggactgcag
ctcatcatcgtcatcctgcccggaaagactcccgtctacgcggaggtgaagagagtggga
gatactctcctaggaatggccactcagtgtgtccaggtgaagaacgtggtgaagacgtcc
ccccagaccctctctaacctctgcctcaagatcaatgtcaagctggggggaatcaacaat
atcctggtgccccaccaacggtcagcagtgttccaggagcctgtcatcttcctgggggcc
gatgtaacacacccccctgctggagatgggaagaagccctccattaccgctgtggtaggc
agtatggacgcccaccccagcaggtactgtgccacagtccgggtccagaggcccaggcag
gagattatcgaagacctttcttacatggtgcgagaactgctgatccagttctacaagtcg
acccgcttcaagcccaccaggatcatcttctacagggacggagtgcctgaggggcagcta
ccacagatactccactacgagcttctggccatcagggatgcgtgcatcaagctggagaag
gactaccagcctggtatcacctacatcgtggtccagaagcgccaccacacacgcctcttc
tgtgccgacaagtctgagagaatcgggaagagtggtaacattcctgcagggaccacagtg
gacaccagcatcactcacccgtttgagtttgacttctacctttgcagtcacgcgggtata
caggggactagtcggccctcacattactatgtcctgtgggacgacaatcgtttcaccgcc
gacgagctgcaaatcctcacttaccagctgtgccatacctacgtccgctgtacccgctct
gtctccatccccgcgccagcctactacgcccgcctcgtggccttccgtgcccgctaccat
ctggtggacaaggagcacgacagtggggagggcagccatgtctctgggcagagtaacggt
cgggacccccaggctctggccaaggcggtgcagattcaccacgacacgctgaggaccatg
tacttcgcctga
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