Salvelinus namaycush (lake trout): 120048374
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Entry
120048374 CDS
T07522
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2-like
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120048374
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
snh03310
]
120048374
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120048374
Nuclear receptors [BR:
snh03310
]
1. Thyroid hormone like
1D. Rev-Erb
120048374
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CCDC22_CC
Motif
Other DBs
NCBI-GeneID:
120048374
NCBI-ProteinID:
XP_038850227
UniProt:
A0A8U0QVE2
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Position
Sna5:complement(48282466..48292349)
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AA seq
592 aa
AA seq
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MGSIKPGGVIAYISSGSASSPESCLSDSCSSGYLCSSSPHPSLPSRAVGIMVDIARPTTA
KHPRSHGTDKTGRSTSTKSSITKINGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQ
HSIRYKKCLKMENCTVIRINRNRCQQCRFKKCLAVGMSRDSVRFGRIPKREKQRMLLEMQ
NAMNNMVMNNNSQLHSMLHGTQSPPCPTEGLPNDGSSASSASSSSSISSSSGSSPSSPCS
AQDSMETSSSSASSCSSDSGDDEVPHSRVCHQGTFTYRREQQQSIKEEPEESPSPVTRET
VKDRRDSRLEELQESWKRCNKDARGYQPSCNSHQHVTNGPYREERVVYQQLNGAPSGRMP
EDSYSLHHRSHNTMHNLQTVSSGYSGPSYSLQDHKTNMVTPSLYVDPSQRSQEIWEEFSL
SFIPAVHEVVGFAKRIPGFRDLSEYDQVSLLKNGTFEVLMVRFASLFNVAERTVTFLTGK
CYSLELLRSLRAGQLLTSMCDFSEKLAALQLDKDEMSLFIAVVLVSADRSGIQDLKSVEA
LQDTLIRALRSLIMKNHANETTTFTKLLLKLPELRSLNNVHSEELLAFKVHS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgggctcaatcaagcctggtggtgtaatagcctacatctcttctggctccgcctccagt
ccggagtcctgtttgagtgacagctgcagcagcggctacctgtgctcctcttcgcctcat
ccctcactgccaagccgggcagtaggaatcatggtggacatcgcccgccctaccacagcc
aagcacccacgtagccacggcacagacaagactgggcgatccacctccaccaagagcagc
atcaccaagatcaacggcatggtgttgttgtgtaaggtgtgcggcgacgtggcctcgggg
ttccactatggcgtccacgcctgcgagggctgtaagggtttcttcaggaggagcatccag
catagcatccggtataagaagtgcctgaagatggagaactgcaccgtcataaggatcaac
aggaaccgctgtcagcagtgccgcttcaagaagtgtctggctgtgggcatgtctagagac
tctgtcaggtttggccgcatcccaaagagagagaagcagcgcatgctgctggagatgcag
aacgccatgaacaacatggtgatgaacaacaacagccagctccacagtatgctccacggc
acccagagtccaccctgtcccacggaagggctccccaatgacggcagctccgcttcatct
gcctcttcttcctcatctatctcgtcttcatcaggctccagcccttcctcaccctgttcc
gctcaagactccatggagaccagctctagctccgcctcttcctgttcatcggatagcggc
gatgacgaggttcctcattccagggtgtgtcaccagggcacattcacgtaccgccgtgag
cagcaacagtccatcaaagaggaaccggaggagtcaccttcgccggtcaccagggaaact
gtaaaagacaggagagacagccgccttgaggaactgcaggagagctggaaacgctgcaac
aaagacgccaggggttaccaacctagttgcaacagccatcaacacgtcaccaacggtccc
taccgggaagagagagttgtttaccagcagctaaacggcgcccccagtggtagaatgcca
gaggactcctacagcctccatcacaggagccacaacacaatgcacaacttacagaccgtc
tccagtggttacagtggaccatcatacagcctacaggaccacaagacaaacatggtcact
cctagtctctatgtggaccccagccagcgcagccaggagatctgggaggagttctccctg
agtttcatcccggccgtgcacgaggtggtggggtttgccaagaggatcccgggcttccga
gacctctccgagtacgaccaagtcagcctgctcaaaaacggaacgtttgaggtgcttatg
gtgcgcttcgcttctctgttcaacgtggccgagcgcaccgtgaccttcctgacggggaag
tgttacagcttggagctgctgcgctcgctgcgggccgggcagctgctcacctccatgtgt
gacttcagcgagaagctggccgctctgcagctggacaaggatgagatgagcctcttcatt
gccgtcgtcctcgtctccgccgatcgttcggggatccaggacttgaagtcagtggaggcg
ctgcaggacacactgatccgagcgctgcggagtctgattatgaagaaccacgccaacgag
actaccaccttcaccaagctgctgctgaagctgcccgagctgcgctccctcaacaacgta
cactctgaagaactgctggccttcaaagtgcactcgtaa
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