Salvelinus namaycush (lake trout): 120048411
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Entry
120048411 CDS
T07522
Name
(RefSeq) myocyte-specific enhancer factor 2D homolog
KO
K09262
MADS-box transcription enhancer factor 2D
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
120048411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120048411
04131 Membrane trafficking [BR:
snh04131
]
120048411
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
120048411
Membrane trafficking [BR:
snh04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
120048411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Med3
Caudo_TAP
Motif
Other DBs
NCBI-GeneID:
120048411
NCBI-ProteinID:
XP_038850292
UniProt:
A0A8U0QVH8
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All DBs
Position
Sna5:complement(49943176..50012553)
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AA seq
520 aa
AA seq
DB search
MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST
DMDKVLLKYTEYNEPHESRTNVDIMETLRKKGFNGCNSPEPDGDDSIDQSPLNDDKYRKN
EDLDILFKRYGSAVPQPTFSMPVTVPVSNQNALQFSNSGGLVTTSFVTSTLTDPRLLSPQ
QPLQRNTGSPGLPQRPASAGALLGGELSNSNGGCPSPVPNGYISARASPGLLSVSNGNSL
GKVVLAKSPPPPSPQMVNSRKPDLRVITSQSGKSLMQLNAQRLGGSQGNLSTPVVSVATP
SLLAPFSAMQTAYNTEYQLTSADLTALQTFTPSGLLPSNMSTWQQQPAVSQQQQQQQQQQ
QQQQQQQQQQISLASLSNLVPVGHLPQGTMLTINTNPNISIKSEPVSPNRDRSTPCSTAG
GGGGGGLVTITGAPMSGQYPGALRLEPSTLQGRSPVGSLSSNGSSYEGDRDDGAQGRAQD
FHHQGGASSAMGLLRPSSTQEQQEQEGANVKRMRLDTWVT
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggaaaaagatccaaatacagaggattacagacgaacggaacagacaggtgacg
ttcaccaagaggaagtttggcctgatgaagaaggcgtatgagctgagcgtgctgtgcgac
tgtgagatcgccctcatcatcttcaaccactccaacaagctgttccagtacgccagcacc
gacatggacaaggtcctgctcaaatacaccgagtacaacgagccccacgagagccgtacc
aacgtcgacatcatggagacgttgcgaaagaaaggctttaatggttgcaacagccctgag
ccggacggcgacgactccatcgaccaaagcccgttaaacgacgacaagtaccgcaagaac
gaggacctggatatcctgttcaagcgctatggctcagccgtcccccagcccactttctcc
atgcccgtcacagtgccagtgtccaatcagaatgctctccagttcagtaactctggcggc
ctggtaaccacctccttcgtcacctccaccctcacagacccacgcctgctgtcgccacag
caacctctccagaggaacactgggtctccagggttaccacagcgaccggccagcgcaggt
gctctattgggaggtgaactgagcaactccaacggaggatgcccaagccctgttccgaac
ggctacatcagtgccagggcctcccccggcctcctctccgtctccaacggcaacagcctg
gggaaagtagtcctggccaagtctccacctccgcccagccctcagatggtgaacagccgc
aagcctgatctccgggtcatcacctcccagagcggcaagagcctgatgcagctgaatgct
cagcggttaggcggttctcaagggaacctgtccacgccagtggtttccgtggcgacgccc
agtctcctagcccccttctccgccatgcagacggcctacaacactgagtaccagctgaca
agtgcagatctcacagcgctccagacattcacgccatcagggctgctgcctagcaacatg
tccacctggcaacagcaaccagcagtatcccagcagcagcaacaacagcagcagcaacaa
caacagcagcagcagcaacaacaacaacagatcagcttggcgtcactcagtaatttggtg
ccggtgggccacttacctcagggcaccatgctgacgattaacaccaaccccaacatcagc
atcaagtcggagcccgtgtcacccaaccgcgaccgcagcaccccgtgctccacagctggg
ggtggcggaggagggggcctagtgaccatcacaggggcccctatgtcaggccagtaccca
ggggccctgcgcctggagccgtccaccctgcagggccgctcgcccgtcggcagcctgagc
agcaacggcagctcctacgagggtgaccgggacgatggggcccaagggcgggcccaggac
ttccaccaccagggaggggcctcctcggccatggggctcctgaggccctcgtccactcag
gagcagcaggagcaggagggggccaacgtgaaaagaatgagactggacacctgggtcaca
tag
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integrated database retrieval system
