Salvelinus namaycush (lake trout): 120048423
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Entry
120048423 CDS
T07522
Name
(RefSeq) semaphorin-6D-like
KO
K06842
semaphorin 6
Organism
snh
Salvelinus namaycush (lake trout)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
120048423
NCBI-ProteinID:
XP_038850305
UniProt:
A0A8U0QW07
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Position
Sna5:50635658..50706520
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AA seq
1106 aa
AA seq
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MRLVPGSPRPLPLLAVVLALALTALLPQLAMAVTPFPQDLEPISIGGREHSYLYPSFQGL
MSDNDTVRLGLDFQRMLRINHMLYIAARDHVFAVSLSDSSEQIVPQQKLTWKTKDVDKCT
VRGKNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMSTLEQDGEEVVGQARCPFE
SRQSNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIE
YGNYVYFFFSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPG
DSFFYFDVLQSLTNVLQINLRPAVLGVFTTQANSITGSAVCAFYMDDIEKAFNGKFKEQR
NSESAWTPVPEEQVPKPRPGCCAGDGSAAAYKSSTTFPDDTLTFIKNHPLMDEAVPSVNH
RPYFTRTTSRFKLTQLAVDTSAGPYKNHTVLFLGSEDGRVLKILASTQLNASFSTQLLED
IDVYNPTKCNVRGEDRRVLGLELDREHHALFVAFSSCVVRVPLSRCNDYGSCKKSCLSSR
DPYCVWQRTGSCVTVVPGFRGGFEQDVENGYPHYPDSCHDVLATTRKQSTLADSAYGKTT
PTTTASTTNQVAPFPKVAGDSERGTGPDGGPPVPVGDQGSPDSEPISVEMEGVRRPPEME
KTNHSVHYTLLIACVLVAFVLGAFLSGFLVSCYCNHTGHKTKRLAKDPEAPIPHALSLRS
LAKLNGLLECQNKEDKMEVSSPKLYNSFFQNGKEHHQGAPRRNGGHHPGMSMGDQVHPHH
LHHSSELLGLPTPDSTPELPIKNMKAFKNQWEKNQNCNNAKEPKSHNMGQGSRPSSGQLH
QQIYPYSHSFSNGQALANGHALVGGPQHLEERKIHNTERMLVQQPYPCYPQKVMEVTSLD
ELLKHIHEANASKNAQVMTSSGLSASGGCHGGQLAFANRVQPHIPETESAPYYSSSTLPR
DSLTRRMDVPPDMPPHHQSTLERRHSSQRHSLITAATKIANGGGGGGMVHRQQSFSQRNG
HQHQPPPMLARMNSTGSACEIHYPLIPNGYLTRQQSYNGEQQEDTGGYLHRGAIVRRTTS
LKPDVPPKPLFIPASSPVNQQGNFNY
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggtgcccgggtcgcctcggcccctcccccttctggcggtggtcctggctcta
gccctcacagcactcttacctcaactggccatggcagtcacacccttcccccaggacctg
gagccaatcagcattggggggagagaacactcctacctgtacccaagcttccagggcctc
atgtcggacaacgatacagtacgactgggcctggacttccagaggatgctccggatcaac
cacatgctctacatcgcagccagggatcatgtgtttgctgtcagtctcagcgactcctct
gagcagatcgtcccacaacagaaattgacttggaagacaaaggacgtggataaatgcaca
gtgagggggaagaacagcgatgagtgctacaactacatcaaagttctggtcccacgcaac
gacgagacgctatttgcctgcggtaccaacgcctttaaccccacctgccgcaactacaag
atgtctacactggaacaggacggtgaggaggtggtgggtcaggcccgctgtccctttgag
tctcgccaatccaacgtcggcctctttgctggtggcgatttctactcggccactatgaca
gacttcctggcgagtgatgcggtaatttaccgtagtctgggagagagcagcccagtgctt
cgtaccgtgaagtacgactccaaatggctacgagagcctcatttcctccatgccattgag
tacgggaactacgtgtacttcttcttcagtgagattgctgtggagtacaccacacttggc
aaggttgtgttctccagagtggctcgtgtatgtaagaacgacaacggaggttctcccagg
gttctagagcgttactggacgtcgttcctcaaagcgcggctcaactgctcggtgccgggc
gattccttcttctactttgacgttctgcagtcgctgaccaacgtgctgcagatcaatctc
agaccagccgtgctgggggtcttcactacacaggccaacagtatcacaggctcagcagta
tgtgcattctacatggacgacattgagaaggctttcaacgggaagttcaaggagcagagg
aacagtgagtcagcctggacacccgtgcctgaggagcaggtacccaaacccagaccaggc
tgctgtgccggcgacggctctgctgctgcctacaagtcgtccacgaccttccccgacgac
accctgaccttcatcaagaaccaccccctgatggacgaggcggttccctccgtcaaccac
cggccctacttcacacgcacaaccagcaggttcaagttgacccagctagcagtggatacg
tctgctgggccctataagaaccacacggtgctgttcctggggagcgaggacggcagggta
ctgaagatcctggccagcacccagctcaacgcctccttcagcacacagctactggaggac
atcgatgtctacaaccccaccaaatgtaatgtccgcggagaggacagacgggttctggga
ttggagctggacagggaacatcacgctctgtttgtggccttctccagctgtgtggtccga
gtacctctgagccgctgcaacgactacggctcctgcaagaagagctgtctgtcctcgagg
gacccttactgcgtgtggcagaggactgggagctgtgtcacggtggtgcccggattcagg
ggcggatttgagcaggatgtggagaacggctaccctcactacccagacagctgccacgac
gtcctggcgaccacacgcaagcaaagcactcttgctgattcagcatatgggaagaccaca
cccacaacaactgccagcacaaccaatcaggtggccccattccctaaggtggcaggtgac
tctgaaagaggtacaggtcctgatggcggtcctccagtcccagttggggaccaggggtca
cctgactcggaaccaatcagtgtggagatggagggtgtccgacggcctcccgagatggag
aagaccaaccacagtgtccactacaccctgctgattgcctgtgtgctggtggcctttgtc
cttggagccttcctctcaggctttctggtctcctgctactgcaaccacaccggccacaag
accaagaggctggccaaggacccagaggcccccattcctcacgccctgtccctacgcagc
ctggccaagctcaatggcctgctggaatgccagaacaaggaggataagatggaggtgtcc
tcgcccaagctctacaactccttcttccagaacgggaaggagcatcatcaaggagcaccc
agacggaacggtggtcaccacccagggatgtccatgggagaccaggtccacccccatcac
ctacaccactcttcggagctcttgggtctgcccaccccagactccacccctgaactgccc
atcaagaacatgaaggctttcaagaaccagtgggagaagaaccagaactgcaacaatgcc
aaagagcccaagtcccacaacatgggacaaggctccaggcccagctcaggccagctccac
cagcagatctacccctactctcatagtttctccaatgggcaagctctggccaatgggcat
gccttggtcggtggacctcagcacctggaggaacgcaagatccacaataccgagcgcatg
ttggtccagcagccttacccctgctacccacagaaggtgatggaggtcacgtcgctggat
gagctgctcaaacacatccacgaggccaacgccagcaagaacgcccaggtcatgacctca
tccggcctgtcagccagcggcgggtgccatgggggtcaactagcctttgccaaccgtgtc
cagccgcacatccccgagacggagtctgcgccttactacagctcatccaccctgccccga
gacagcctgacccgccgcatggacgtacctccggacatgccccctcaccaccagtccacc
ctggagcggagacactcttcccagagacactcactgattaccgctgccactaagattgcc
aacggagggggtggtggagggatggtccaccgacagcaaagcttcagccagcgtaacggc
caccagcaccaaccgccccctatgctggctcgaatgaactccaccggcagcgcctgcgag
atccactacccgctcatccccaacgggtacctgacacgccagcagagctacaacggagag
caacaggaggataccggaggatacctccaccggggggccatagtccgccggaccacctcc
ctcaaacccgacgtccctcccaaacccctcttcatccctgcatcctctcccgtcaaccaa
cagggaaacttcaactactga
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