Salvelinus namaycush (lake trout): 120048537
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Entry
120048537 CDS
T07522
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin-like
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120048537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snh03009
]
120048537
Ribosome biogenesis [BR:
snh03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
120048537
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
PCMT
Methyltr_RsmB-F
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
120048537
NCBI-ProteinID:
XP_038850530
UniProt:
A0A8U0QWH0
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All DBs
Position
Sna5:complement(58408503..58412512)
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AA seq
318 aa
AA seq
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MTPGFSPRGGDRGGFRGRGSFGDRGGGRGGFGDRGGRGGFRGRGGGGGFRSPSGEGGFRG
RGGGRGTPRGRGGRGGFSAGRKVTVEPHRHEGVFICRGKEDALVTKNMVIGESVYGEKRM
NVEEGETKIEYRAWNPFRSKLAAAILGGVDQIHIKPGSKVMYLGAASGTTVSHVSDIVGP
EGLVYAVEFSHRSGRDLLNVAKKRTNIIPIIEDARHPHKYRMLVGMVDVIFADVAQPDQT
RIVALNAHNFLKNGGHFVISIKANCIDSTAAPEAVFAAEVKKMGSENMKPQEQLTLEPYE
RDHAIVVGIYRPAPKNKK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacaccaggattcagccctcggggtggtgatcgaggaggcttccgaggaagagggagc
tttggagacagaggtggtggacggggaggttttggagatagaggcggacggggaggattc
aggggcagaggtggtggaggtggatttaggtctccaagtggcgagggtggcttcagaggc
cgtggaggtggtcgtggcacccccaggggtagaggtggacgcgggggcttcagcgcgggc
aggaaagtcacagtggagcctcatagacatgaaggtgtgttcatctgccgtggtaaggag
gatgccctggtgacaaagaacatggtaattggagagtctgtgtatggagaaaaaaggatg
aatgtcgaggaaggagagacgaagattgagtacagggcgtggaaccctttccggtcaaag
ctggcagcagccatcttgggaggggttgaccagatccacatcaaacctggctcgaaggtc
atgtacctgggagctgcatcagggacgacagtgtcccacgtgtcagacatcgttggacct
gagggtcttgtgtatgctgtggagttctctcacaggtcagggcgtgatctgctcaatgtt
gccaaaaagagaaccaacataattcccatcattgaggacgcccggcatccacacaaatac
cgcatgcttgttggcatggtagatgtcatcttcgctgatgtggcccagcctgatcagacc
agaattgttgcactcaacgctcacaacttcctcaagaacggagggcactttgtcatctca
atcaaggcaaactgcattgactcaacggcagcaccggaggctgtgtttgctgcggaggtg
aagaagatgggctcagaaaacatgaagccccaggagcagctgacactggagccttatgag
agagatcacgccatcgtagtaggaatctacagacctgcccccaagaataagaagtga
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