Salvelinus namaycush (lake trout): 120048622
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Entry
120048622 CDS
T07522
Name
(RefSeq) basal cell adhesion molecule-like
KO
K06578
basal cell adhesion molecule
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120048622
04090 CD molecules [BR:
snh04090
]
120048622
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
Other
120048622
CD molecules [BR:
snh04090
]
Proteins
120048622
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
C2-set_2
V-set
Ig_4
C2-set_3
C1-set
Orf78
Psg1
Amnionless
S1FA
Motif
Other DBs
NCBI-GeneID:
120048622
NCBI-ProteinID:
XP_038850650
UniProt:
A0A8U0QWQ8
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All DBs
Position
Sna5:61013166..61105426
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AA seq
611 aa
AA seq
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MDGMVAFGRTSLLCTLLLCFSLQVCWAVVTVTVTPKVEVIKGESASLPCTFKIPPSLNNI
VEWFIEEGGTRKRVAFRSVSGGEGKTDEGTRLSDRVTMGRDFSLTISPVAVEDQLPFYCQ
VTAGPAGVGEAITQLKVFFAPEMPEVTGSNQALSVGDSSTQVGQCVSHNGHPQPRIIWFQ
DSKPLPEVKDNKEKVYMVPSVVKEASGLFTITSTLMMQPQKADKDSVYHCTVEYSMPNDM
IKQIDSDTFSLTLNYPSETATFVLVNTEPIREGDEVKMMCETDGNPQPEIEFFKDGINIK
EGVAGGLLTLKSVKRSDAGVYKCTAIDFDNLDADLNGEVTLSVHYIDPMSVRPAGPLSTM
TGDMVELQCKTKASDTHTVQWKKGSTVLSQTGVLSLKSVTFAEAGEYSCVGAVPSVLGLT
SKASVNLTVSGKPEIEAAVDGMVEKEGDMVTLSCSAHGHPAPQFTWTPSGKESVSVKGNK
VVSMVMLKASAAVVKDGVTCEASNDHGEASQAFKVTIKQAVDPNAANDAGRADKQQGGSS
GVVIAVVVCVLMLLLLVALLYFLNKKGKLPCSKKDNKEVASGDVNNDIVVEMKTENANEE
AGLLNKPAAQQ
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggacgggatggtagcatttggacgcacttcgctcttgtgcaccttgctgctttgcttt
tcattgcaagtgtgctgggccgtcgtgacagtgacagtgactcccaaggtggaggtgatc
aagggagagtcagccagtctgccctgcaccttcaaaatccctccctccctgaacaacatc
gtagagtggttcattgaggagggtggcactaggaagcgtgttgcgttccgctccgtgtcg
ggcggcgaggggaagactgatgaggggacacgtctgtccgacagagtgaccatgggaagg
gacttttctctgaccatctcccccgtggcggtggaggaccagctgcccttctactgccag
gtcactgctggccctgctggagtcggagaggccatcacacagctcaaagtcttcttcgct
ccagagatgccagaggtcactggatccaaccaggccctatctgttggtgactcctccaca
caggtgggccagtgtgtgagccataacggtcacccccagcccaggatcatctggttccag
gactccaagcctctgcctgaggtcaaggacaacaaagagaaggtgtacatggtgccgtca
gtggtaaaggaagcatcaggtctgttcaccatcaccagcaccctgatgatgcagccccag
aaggctgacaaggacagcgtgtaccactgcaccgtggagtacagcatgcccaacgacatg
atcaaacagatcgactctgacaccttctccctcaccctcaactatccctctgagacagcg
acctttgtcctggtgaacactgagccaatcagagagggtgacgaggtgaagatgatgtgt
gagacagacggaaaccctcagcctgagattgagttcttcaaggatgggataaacattaag
gaaggagttgcagggggacttttgactctgaagtccgtcaagcgttcggatgctggggtg
tacaagtgtacggccatcgactttgataacctggatgctgatcttaatggagaagtcact
ctctctgtccactacattgacccaatgagtgtgaggcctgccggtccattgtcgacaatg
acgggagacatggtggagctgcagtgtaagaccaaggcctcagacacacacaccgtccaa
tggaagaagggctccacggtgctgtcccagactggtgtcttgtctctgaagtcagtgaca
ttcgctgaagctggcgagtactcctgtgtgggcgcagtgccctctgtgctcggactcacc
tccaaggccagcgtcaatctcaccgtctcaggtaaacctgagatagaagcagctgttgat
ggaatggtggagaaggagggagacatggtgactctgtcctgctctgctcacggacatcct
gccccacagttcacctggacaccctcaggaaaggagtcggtgtcggtgaagggtaacaag
gtggtcagtatggtcatgctgaaggccagtgctgcggtcgtgaaggacggggtcacctgc
gaggccagtaacgaccacggagaagcctctcaggccttcaaagtcaccatcaaacaagcc
gtcgatcccaacgcagccaatgatgcaggcagagctgataagcagcagggtggctccagt
ggcgtggtgatagccgtggtggtgtgtgtcctaatgctgctgctgctggtggcactcctc
tacttcctcaacaagaagggcaagctgccctgcagcaagaaggacaataaggaagtggca
agtggggatgtgaataatgacattgtggtggagatgaagacagaaaatgccaatgaagaa
gctggcctcctgaacaagccagcagcacagcagtga
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