Salvelinus namaycush (lake trout): 120048667
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Entry
120048667 CDS
T07522
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
snh04054
]
120048667
Pattern recognition receptors [BR:
snh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
120048667
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
TIR
TIR_2
LRR_9
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
120048667
NCBI-ProteinID:
XP_038850708
UniProt:
A0A8U0QV98
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Position
Sna5:62125672..62128707
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AA seq
974 aa
AA seq
DB search
MAGLKYKILASVAIVLHIAQFTVGYSFRNCTEDPTSNHTKFICIHHQAKNISTIVGDLPP
YATTIIISVNLIKHIPDNTFDHFPNLRTLQIDNNHLETIDNQPFQNMSQLKSLNLSLNKI
SNLSSSVFQDLKNLVNLSLNNNSLIMLPPGIFSSLSNLDVLILRQNYLNNFSAVAESVTH
LTKLTKLDLCNNYLTSLHHSNHTDLPESLTSLYLCKNKLVTLACEWGFLSHVLLLDLSYN
NQLPSRAFQGLDLQKLNYMRLRSTNVTVPELLNVSNVRAGNIDFSGMGLKTDNLLMELCS
LLSTKVTFVKKLSLGSNGILSLRKNTLSNCPPIRGLLDLSFNQLRKVRCLHFLKGQDQIK
NFTAEKNHLTSLMSCNRQNLSFPNLTDLSYRYNRILKVNSFAFHHTPNVKTLQLNINIIA
YLDHKAFSGLTSLVTLRLDNNLLTDLYKDSFEDLHSLEILNLRNNQIAVIFNKTFHSLKC
LHILDLGGNKISHFEESAFVGLVNLANLYLDGNNLKQIDSAKFKPFHATLEVLDLHGNQV
SFSSKRTNSPFVNLTKLRNLKLDAQMPHGLNMLPYAFFRGLNSLQSLYLTDNHIFSFAAD
TFDDLTNLTFLSLDNSCAGVMQLQPGVFKNLRKLSKLSARNMGIQSFSNEVFGNLTELQI
LLLNQNVMQSLDWKVLEALPKLRYLDLRNIPLSCTCINSHLQNWTLTNQRVQLVLLYSLQ
CQDKKLQKSFYNFDTNVCYLDLGEYLFATTTTVILLLTIIPLLYTKLYWKLKYSYYVFRS
WFGQHWRRLRQKEEHCKYDAFISYNSADEPWVLDQLLPNLEGNGASFRLCLHHRDFELGR
NIVDNIVSAVYSSRKTICVVSRNFLCSEWCSLEIQLASYRLFHELRDVLLLIFLEPIPER
QLSAYHRMRKVMLKKTYLQWPGSDCTDPVKAQELFWNHLRRALRSGSSRFEEEDEGREEY
FNQPPTDDNYYLMP
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggccgggctaaaatataaaatattggcatcagtggcaattgtccttcacattgcccag
ttcacagttggctatagcttcaggaattgcactgaggatccaacctcaaaccacacaaaa
ttcatttgcatccatcaccaggcaaagaacatttctaccattgtaggtgacctgccacct
tatgccaccacaattataatctccgtaaacctgataaaacacatacctgacaataccttt
gatcactttcctaacctcaggactcttcagattgacaataaccatctggagaccatagat
aaccagccattccaaaatatgagccaactgaagagcctaaacctgtccttgaacaaaata
tcaaatctcagctcctctgtatttcaagacctcaaaaaccttgtcaacctgtcactaaat
aataactcactgattatgctccctccgggtattttctcttcactctccaatctggatgtc
ctcatattacggcagaactacctgaacaacttctctgcggtggcagaatctgtgactcac
ttaacgaagctgacaaaactagacctgtgcaataactatctaacgtccctccatcattct
aaccatacagacctaccggagtccctcacctccctctatctctgtaaaaacaaactggtc
actttagcatgtgagtggggcttcctcagccatgtactactgctggatctctcctacaat
aaccagctcccttcgagggcttttcaaggtctggacttgcagaagctaaactacatgcgt
ttgcgttcaaccaatgttacagtgccagagcttttgaatgtcagcaatgttagagctggg
aacatagacttctctggtatggggttgaagactgacaatctgctcatggagttatgcagc
cttttgagtacaaaggtcacatttgttaaaaagttgagtctgggaagcaatgggattctg
tcattgcgaaagaacacactttcaaactgtccaccaatccgaggtttattggacctttcc
ttcaaccagttgaggaaggtaagatgcctccactttcttaaaggacaggatcaaatcaag
aacttcacagcagagaaaaaccacctcacctccctaatgtcctgcaacagacagaacctc
tctttcccaaatctgacagatctgagctaccgttacaatcgcatactcaaagtcaactct
tttgctttccaccacacaccaaatgtgaagaccctacaactcaacataaacataatcgcc
tatcttgaccataaggctttcagtgggctgactagtcttgtcacactgcgtctggacaat
aacctcctgaccgatctgtacaaggatagctttgaagatctgcatagcctggaaatactt
aatctacgtaacaatcagatagctgttattttcaacaagactttccattcactcaaatgc
ctgcacattttggatcttggagggaacaaaatcagtcattttgaagagtcagcctttgtg
gggctcgttaacctggccaatttgtacctcgacggaaacaatctcaaacagatcgacagc
gccaagtttaaaccattccacgccacacttgaagttcttgatctacatgggaatcaggtt
agcttctcctctaaacgtaccaactctcctttcgtgaatctaacaaaacttcgcaacctc
aaactagatgcgcagatgccccacggcctcaacatgctgccttatgcctttttccgtggt
ctcaactccctccaatcgctctacctcaccgacaatcacatcttcagcttcgcagcagac
acttttgacgatctgaccaacttgactttcctctccttggacaactcctgtgccggggtg
atgcagctgcagccgggcgtcttcaaaaacctgcggaaattgagcaagctcagtgcaagg
aacatgggcatccagtccttctcaaatgaggtttttgggaatctgacagagctgcagatc
ttgcttctcaaccaaaacgtaatgcaatccttagattggaaagtgctggaggctctccct
aaactgcgctacctggacctgcgcaacattcctcttagttgcacctgcatcaacagtcac
ctgcagaactggactttgactaaccagagagtccagttagtcttactatacagtttacag
tgccaagataaaaaactccaaaaaagcttctacaactttgacaccaatgtttgctacctg
gacctgggagagtacctttttgctaccacaaccactgtgattttactgctgactataatc
ccacttctctacaccaagctgtattggaaactgaagtatagctattatgtgttccgctcc
tggttcggccaacactggcgcaggctgaggcagaaagaggagcactgcaaatacgatgct
ttcatctcctataactcggcggacgagccctgggtactagaccagctacttcccaacctg
gagggcaacggagcctctttccggctgtgcctgcaccaccgtgactttgagctgggccgc
aacattgtggacaacatcgtctccgccgtgtacagcagccgcaagaccatctgcgtggtt
agtaggaatttcctgtgcagcgagtggtgctccctggagatccagctggccagctacagg
ctcttccacgagctccgggacgtgctcctgctcatcttcctggagcccatccctgaaaga
cagctgtcggcttaccaccgtatgagaaaggtcatgttgaagaagacctacctgcagtgg
ccggggtcagactgcactgacccggtcaaagcccaggaactgttttggaaccatctgagg
agggcactgaggagcgggagcagcaggtttgaagaggaggatgaggggagggaggaatac
ttcaatcagccaccgacggatgataactattacttaatgccttaa
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