Salvelinus namaycush (lake trout): 120048792
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Entry
120048792 CDS
T07522
Name
(RefSeq) nibrin-like isoform X1
KO
K10867
nibrin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03440
Homologous recombination
snh04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120048792
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
120048792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snh03032
]
120048792
03400 DNA repair and recombination proteins [BR:
snh03400
]
120048792
DNA replication proteins [BR:
snh03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
120048792
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
120048792
BRCA1-C complex
120048792
BRITE hierarchy
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Gene cluster
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Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
120048792
NCBI-ProteinID:
XP_038850945
UniProt:
A0A8U0QWS7
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Position
Sna5:complement(67351796..67370353)
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AA seq
840 aa
AA seq
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MWTLNPLESGGVTHYLLPDKEYVVGRKNCEVILPNDQSISRAHAHLTATDQALTLKDSSK
YGTFVNEERLSGDTPRSLTAGDRVTFGVFHSKFSVQQVTAVVCSSCVDNEGKVSLSQTLQ
LLGGRLTNTWTQDCTHLVMPTVKVTIKTICALLCCRPIVKQEFFTELTKALQQKQPPPKA
ESFFPEIDEPSLNKDEVDLTERPERKELFTGKTFLFLNAKQQKRLSLAVSCGGGRSQLLE
EGSIPVSLLESPLSCVIGMATGNSQALLPHSTKKWADSVGKILQRKGLRFITESEIGLAA
IYVSCDKYCNPSNQMADSESMRMKLTIPGATLSQNAPVDETVMPAASQNITAYAVNTEPS
QGISGVDVAGVSAVEKTPERDQSRATSHLNRSKPSGRELAGTCTVAETMMSSFSASDSAG
GGGSDRKKGELQHPGGEKGDAITRFLATAPRTNGGVQTMSPQKRSSQKQQVSQKGSPQKQ
SALTNFFQPVGKKRPREGEESPTVQSEAKLSRREEDQEKMKRTVPHHSETSNPTHPPTGR
SQGQHSSGAHLFPGQTEALSEGFSNPAQQGLQSRKRKEMEEETKGGGASEIEMDELESIM
SEDMDESDEPMSASQGQRLKLTEQSSTNQGQRSQLMDKSSTNRKQLLETVELTSANKKQR
VYPVEPIAANHRSGLDAEERSSASRRQRAAPVAEVKDEEVSFIESKPVNGVTPGHLEEPE
TDVKQEASGLGGENLPSRLIVVEFKSLTGATPARPKPRPMETHGNVNRKDFKRFRKVPVP
GAQGLPNIIGGSDLLAHNRCKNSELEEWLRDAAEDERQNKKEETLGDDLFRYNPKPTKKR
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtggacactgaaccctttagaatccggaggtgtcacccactacctcctgccagataag
gagtatgtggtggggcgtaagaactgtgaggtcatcctgcccaatgaccagtccatcagc
cgggctcatgctcacctcactgctacagatcaggccctgaccctgaaggacagttctaag
tatggcacgtttgttaacgaggagcgtctgtcaggagacacccctcgcagcctgacggca
ggggacagagtgacatttggggtctttcacagcaaattcagtgtgcagcaggtaactgcg
gtggtgtgctcgtcctgtgttgataatgaagggaaggtttcactgtctcagaccctgcag
cttctgggtggccggctgaccaacacctggacacaggactgcactcacctggtcatgccc
actgttaaagtcaccatcaagactatctgtgctttgctgtgctgtcggcccatagtcaag
caggagtttttcactgagctcaccaaagccctgcaacagaaacaaccacctccaaaagct
gagagtttcttcccagagatagacgagcccagtctgaataaggatgaggtggacctgacc
gagaggccagaacgtaaagaactttttactggcaagaccttcctcttcctcaatgcaaaa
cagcaaaagcgtctgagtttggcagtgagttgtggaggtgggaggagccagctcttggag
gaggggtctattcctgtgtcactcctggaatcaccattgagctgtgtgatcggcatggca
acgggaaactcccaagcactactgccccactccactaagaagtgggcagactctgtgggg
aagattctacagaggaaaggtcttcgattcatcacagagtctgagatcggactggctgcc
atctatgtcagctgtgacaagtactgcaatccctccaatcagatggctgactcagaatcc
atgagaatgaaactcaccatccctggcgccacgctatcccagaatgcaccagtggacgag
acggtaatgccagcagcgtctcagaacatcacagcctatgctgtaaacacagagccgtca
cagggcatcagtggggtggacgtggctggggtgagcgcagttgaaaagacccctgagagg
gaccagagccgggccacctctcatcttaaccgatccaaaccctcaggccgagagctggcc
gggacctgcacagtggcagagactatgatgtcatcattcagcgcctcagacagcgctggt
ggtggcggctcggacagaaaaaagggagagctacaacatccaggtggagagaaaggtgat
gctatcaccagattcctggccacagcccctcggaccaacggaggagtgcagacgatgtcc
ccacagaagcgctcctcccagaaacaacaggtctcgcagaaaggttccccccagaaacag
tctgccctcactaatttcttccagcctgtcggcaagaaaagacctcgggaaggcgaggag
tcccctactgtccaatcagaggccaagctctccaggagggaagaagatcaggagaagatg
aagaggacagtaccacatcactcagagacctccaaccccacacacccccccacaggcagg
tcccagggccaacacagctcaggtgcacatctgtttccaggtcagactgaggctctgtca
gaggggttctccaaccctgcccagcaggggctccaatccaggaagaggaaggagatggag
gaggagactaaagggggtggggcttcagagatagagatggacgaactggagtccatcatg
tctgaggacatggatgaatcggatgagcctatgtcagccagtcaaggccagcggttgaag
ctgacggaacagagttcaaccaatcaaggccagaggtctcaactgatggacaagagctca
accaatagaaaacagctcctagagacagtggaacttacctctgccaataagaaacagcgg
gtttatccagtggaaccaatcgcagccaatcataggtcaggcttggatgcagaagagcga
tcgtcagccagcagacgacagcgagcggcgcctgtagctgaggtcaaagacgaagaggtg
tctttcattgagtcaaaacctgttaatggtgtgacccctggtcatctggaagagccagag
actgatgtcaaacaggaagcctcaggtttagggggtgagaatctccccagcagacttata
gtggtggagttcaaatccctcaccggggcaacaccggcaagacctaaaccacgccccatg
gagacgcacggcaatgtcaacaggaaggactttaaacgcttccgcaaggtcccagttccc
ggtgcccagggtttgcccaacatcatcggagggtcagacctgttggcccacaaccgatgc
aagaactctgagctggaggagtggctgagagacgcagcagaggatgagcgtcagaacaag
aaagaggagactttgggagatgacctcttcaggtacaaccccaaacccaccaagaaaaga
tga
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