KEGG   Salvelinus namaycush (lake trout): 120048826
Entry
120048826         CDS       T07522                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120048826
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:snh03041]
    120048826
Spliceosome [BR:snh03041]
 Complex A
  U2 snRNP components
   U2 related factors
    120048826
 Complex B
    120048826
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 AAA_8
Other DBs
NCBI-GeneID: 120048826
NCBI-ProteinID: XP_038851010
UniProt: A0A8U0QWE1
LinkDB
Position
Sna5:complement(68539490..68548601)
AA seq 480 aa
MSDFDEFERQLSENKQAEKDKENRHHRRSPSRSRSRERKRRSRDKDRRSRDRRGDSKERR
PRRSSPSQQQPQEIAVSRSPHRETKKKNKVKKYWDVPPPGFEHISVMQYKAMQAAGQIPA
TALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGL
TQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGM
SENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGL
SKGYAFCEYVDVNLNDQITMENQAIAGLNGMQLGDKKLLVQRASVGSKNATLTSINQTPV
TLQVPGLMNSSMTQMAGLPTEVLCLMNMVAVEELVDEEEYEEIVEDVRDECSKYGQVKSI
EIPRPVDGLEVPGTGKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgtcggatttcgacgaattcgagagacaactgtctgaaaacaaacaagcggagaaggac
aaggagaaccgccaccaccgtcgctccccctctcgcagccgcagcagagagaggaagagg
aggagcagagacaaggacagacgcagcagggatcgccgtggagacagcaaggagcgcaga
ccgagacgcagctcaccatcccaacaacaaccccaagagattgctgtaagtcgttccccg
caccgtgaaacgaagaagaagaacaaagtgaagaagtactgggacgtccctcctcctggc
tttgaacacatcagtgtgatgcagtacaaagccatgcaggctgcgggtcagatcccagcc
acggccctgctgcccaccatgaccccagacggcctggccgtgacccccactcctgtccct
gtggtgggaagccagatgaccagacaggcccgtcggctctacgtggggaacatccccttc
ggcatcacagaggagtccatgatggatttcttcaacgctcagatgcgtctgggcggtctc
actcaggctccagggaaccctgtcctcgctgttcagatcaaccaggacaagaactttgcc
ttcctcgagttccgctcagtggatgagacaacccaggccatggcgttcgacggcatcatc
ttccagggacagagtctgaagatccgccgtccccatgactaccagcccctgcccggcatg
agcgagaaccccagcgtctacgtgcctggcgtggtgtccacagtggtgcctgactcagcc
cacaagctgttcatcgggggcctgcccaactacctgaatgatgaccaggtgaaggagctc
ctgacatcgtttgggcctctcaaggcctttaacttggtcaaggatagtgccacaggtttg
tctaagggttatgcgttctgtgagtatgtagacgtcaacctgaacgaccagatcaccatg
gagaatcaggccatagcaggactcaacggcatgcagctgggagataaaaaactcctggtg
cagagagccagcgtgggatccaagaacgccactctgacaagtataaaccagaccccggtg
acgctgcaggtgccgggcctgatgaacagctcaatgacccagatggccggcctgcccact
gaggtgctgtgtctgatgaatatggtggctgtggaggagctggtggatgaagaggaatac
gaggagatcgtggaggatgtgagggacgagtgcagcaagtacggccaggtcaagagcatc
gagatccccagacctgtggatgggctggaggtccctggcactggcaagatctttgtggag
ttcatgtcagtgtttgactcccagaaggccatgcagggtctgacgggcaggaagtttgcc
aaccgggtggtggtgaccaaatactgcgaccctgatgcctaccaccgccgagacttctgg
tag

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