KEGG   Salvelinus namaycush (lake trout): 120048872
Entry
120048872         CDS       T07522                                 
Name
(RefSeq) nibrin-like isoform X1
  KO
K10867  nibrin
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03440  Homologous recombination
snh04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    120048872
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    120048872
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:snh03032]
    120048872
   03400 DNA repair and recombination proteins [BR:snh03400]
    120048872
DNA replication proteins [BR:snh03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    120048872
DNA repair and recombination proteins [BR:snh03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     120048872
    BRCA1-C complex
     120048872
SSDB
Motif
Pfam: Nbs1_C NIBRIN_BRCT_II FHA Yop-YscD_cpl BRCT RTT107_BRCT_5 PTCB-BRCT
Other DBs
NCBI-GeneID: 120048872
NCBI-ProteinID: XP_038851099
UniProt: A0A8U0UG87
LinkDB
Position
Sna5:71905837..71924565
AA seq 828 aa
MWTLNPLESGGVTHYLLPDKEYVVGRKNCEVILPNDQSISRAHAHLTATDQALTLKDSSK
YGTFVNEERLSGETPRSLTAGDRVTFGVFHSKFSVQQVTAVVCSSCVDNEGKVSLSQTLQ
LLGGRLTNTWTQDCTHLVMPTVKVTIKTICALLCCRPIVKQEFFTELTKALQQKQPPPKA
ESFFPEIDEPSLNKDEVDLTERPERKELFTGKTFLFLNAKQQKRLSLAVSCGGGRSQLLE
EGSVPVSLLESPLSCVIGMATGNSQALLPPSTKKWADSVGRILQRKGLRFITESEIGLAA
IYVSCDKYCNPSNQMADSESMRMKPTIPGATLSQNAPVDETVMPAASQNITAYAVNTEPS
QGISGVDVAGVSAVGETPERDQSRTTSHLNRSKPSGRELAGTCTVAETMMSSFSASDSAG
GGGSDRKRGELQHPGGEKGDAITRFLATAPRTNGGVQTMSPQKRSSQKQQVSQKGSPQKQ
SALTNFFQPVGKKRPREGEESPTVQSEAKLSRREEDKEKSKRTVPQHSETSNSTHTPAGR
SQGQHSSGAHLFPGQTEALSEGFSNPAQQGLQSRKRKEMEETKGGGASEIEMDELESIMS
EDMDESDEPMSASQGQRLKLTDKSSTNRKQLLETVELTSANKKQRVYPVEPIAANHRSGL
DSEERSSASRRQRAEPVAEVKDEEVSFIESKPVNGVTPGHLEEPETDAKPVKQEASGLGG
ENLPSRLIVVEFKSLTVATPARPKPRPMETHGNVNRKDFKRFRKVPVPGAQGLPNIIGGS
DLLAHNRGKNSELEEWLRDAAEDERQNKKEETLGDDLFRYNPKPTKKR
NT seq 2487 nt   +upstreamnt  +downstreamnt
atgtggacactgaaccctttagaatccggaggtgtcacccactacctcctgccagataag
gagtatgtggtggggcgtaagaactgtgaggtcatcctgcccaatgaccagtccatcagc
cgggctcatgctcacctcactgctacagatcaggccctgaccctgaaggacagttctaag
tatggcacgtttgttaacgaggagcgtctgtcaggagaaacccctcgcagcctgacggca
ggggacagagtgacatttggggtctttcacagcaagttcagtgtgcagcaggtaactgcg
gtggtgtgctcgtcctgtgttgataatgaagggaaggtctcactgtctcagaccctgcag
cttctgggtggccggctgaccaacacctggacacaggactgcactcacctggtcatgccc
actgttaaagtcaccatcaagactatctgtgctttgctgtgctgtcggcccatagtcaag
caggagtttttcactgagctcaccaaagccctgcaacagaaacaaccacctccaaaagct
gagagtttcttcccagagatagacgagcccagtctgaataaggatgaggtggacctgacc
gagaggccagaacgtaaagaacttttcactggcaagaccttcctcttcctcaatgccaaa
cagcaaaagcgtctgagtttggcagtgagttgtggaggtgggaggagccagctcttggag
gaggggtctgtccctgtgtcactcctggaatcaccattgagctgtgtgatcggcatggca
acgggaaactcccaagcactactgcccccctccactaagaagtgggcagactctgtgggg
aggattctacagaggaaaggtcttcgattcatcacagagtctgagatcggattggctgcc
atctatgtcagctgtgacaagtactgcaatccctccaatcagatggctgactcagaatcc
atgagaatgaaacccaccatccctggcgccacgctatcccagaatgcaccagtggacgag
acggtaatgccagcagcgtctcagaacatcacagcctatgctgtaaacacagagccttca
cagggcatcagtggggtggacgtggctggggtgagcgcagttggagagacccctgagagg
gaccagagccggaccacctctcatcttaaccgatccaaaccctcaggccgagagctggcc
gggacctgcacagtggcagagactatgatgtcatcattcagcgcctcagacagcgctggt
ggtggcggctcggacagaaaaaggggagagctacaacatccaggtggagagaaaggtgat
gctatcaccagattcctggccacagcccctcggaccaacggaggagtgcagacgatgtcc
ccacagaagcgctcctcccagaaacaacaggtctcgcagaaaggttccccccagaaacag
tctgccctcactaatttcttccagcctgtcggcaagaaaagacctcgggaaggtgaggag
tcccctactgtccaatcagaggccaagctctccaggagggaagaagacaaggagaagtcg
aagaggacagtaccacagcactcagagacctccaactccacacacacccccgcaggcagg
tcccagggccaacacagctcaggtgcacatctgtttccaggtcagactgaggctctgtca
gaggggttctccaaccctgcccagcaggggctccaatccaggaagaggaaggagatggag
gagactaaagggggtggggcttcagagatagagatggacgaactggagtccatcatgtct
gaggacatggacgaatcggatgagcctatgtcagccagtcaaggccagcggttgaagctg
acagacaagagctcaaccaatagaaaacagctcctagagacagtggaacttacctctgcc
aataagaaacagcgggtttatccagtggaaccaatcgcagctaatcataggtcaggcttg
gattcagaagagcgatcgtcagccagcagacgacagcgagcggagcctgtagctgaggtc
aaagacgaagaggtgtctttcattgagtcaaaacctgttaatggtgtgacccctggtcat
ctggaagagccagagactgatgccaaacctgtcaaacaggaagcctcaggtttagggggt
gagaatctccccagcagacttatagtggtggagttcaaatccctcaccgtggcaacaccg
gcaagacctaaaccacgccccatggagacgcacggcaatgtcaacaggaaggactttaaa
cgcttccgcaaggtcccagttcccggtgcccagggtttgcccaacatcatcggagggtca
gacctgttggcccacaaccgaggcaagaactctgagctggaggagtggctgagagacgca
gcagaggatgagcgtcagaacaagaaagaggagactttgggagatgacctcttcaggtac
aaccccaaacccaccaagaaaagatga

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