Salvelinus namaycush (lake trout): 120048891
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Entry
120048891 CDS
T07522
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin isoform X1
KO
K24064
beta-syntrophin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120048891 (sntb1)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
120048891
NCBI-ProteinID:
XP_038851127
UniProt:
A0A8U0QX15
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Position
Sna5:73627261..73685649
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AA seq
530 aa
AA seq
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MAVATVISGNRVQKNGFLEVLVRDRWHKVLANLNEEALTLSCEDLGENVTLNGITNGSYG
CNATHPDHTNSPKTAVRTAFTDLQEQVPEAIANRKRCVKVIKQEVGGLGISIKGGKENKM
PILISKIFKGLAADQTQALYVGDAILSVNGVNLRDATHDEAVQGLKRAGREVTLEVKYMR
EATPYVKKGSPVSEIGWETPPPESPRLGSPHCDVPVTPTMSLQGDRRYIPLKMCYVTRSM
TSPDPENRQLELHSPDAKHTVVLRCTDTASAQAWFEVMQSATSNLINKVITEVKEHTGRT
GIAGSREIRHLGWLAEKTENEKQQWKPVLVMVTEKDLLLYHSLPRMKASWHSPAHTYPLL
ATRLVHSGPDRGSPQPGVELSFATRTGTRLGIEAHLFRAETCQDLSLWTRHIVTGCHSSA
QMIKEVTTSCMYKGQECRLVIHYEQGFSVLAEQKGEDQVDQGNQNQAKPLLCYPFERLKM
SSDDGVRRLFLDFTGKEGEIQLDLHSCPKPIVFILHSFLSAKIARLGLVA
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagctacagtaatttcggggaacagagtacaaaaaaatggctttttggaggtt
ttagtgagggaccgatggcacaaagttttggccaacttgaacgaagaagctctaacgttg
agttgcgaggacctgggagagaatgtgaccctaaacggcatcaccaatggatcttacggg
tgcaacgcaactcacccggatcacacaaacagtccgaaaactgcggtgaggacagctttc
acggatttacaggagcaagtcccagaggcgatcgccaacagaaaaagatgtgtgaaagta
ataaagcaagaggtaggaggactcggcatcagcataaagggaggaaaagagaataaaatg
ccgatacttattagtaagatcttcaaaggtctggctgcggatcaaacccaagccttatat
gtcggtgacgcgattctatcggtgaacggtgtgaacctgcgggacgctacgcatgacgag
gcggtgcaggggctcaaacgagccgggagagaggtgactctagaagtgaagtacatgaga
gaagccaccccctatgtgaagaagggttctcctgtgtcagagataggctgggagacgccc
ccacctgagtctccgaggctgggtagcccccactgtgacgtccccgtcacccccaccatg
tccctacagggggacaggaggtacatccccttaaagatgtgttacgtcaccaggagcatg
acttctccagaccctgaaaacaggcagttagagctgcactctccggacgccaagcatact
gtggtgttacggtgtacagacacagcctcggcccaggcctggttcgaggtcatgcagtcg
gcgacctctaacctcatcaacaaggtcatcacagaggtcaaagagcacacaggaagaaca
ggaatcgcagggagcagagagatcagacacctgggctggctggctgagaagacggagaat
gagaagcagcagtggaagccagtgctggtgatggtgacggagaaagacctgctcctctat
cacagccttccacgcatgaaggcatcctggcacagccctgcacacacataccctctgtta
gctacacggctggtgcactctggtccagaccgaggctctccccagccgggggtggagctg
tccttcgccacacgtacaggaaccagactgggcatcgaggcccacctgttcagagctgag
acctgtcaggacctttcactgtggactaggcacatcgttacgggctgtcactcttctgcc
cagatgatcaaagaagtcactaccagctgtatgtacaagggccaggagtgcaggctggtg
atccactacgagcagggcttctctgtcctggctgagcagaagggggaggaccaggtggac
caggggaaccagaaccaggccaaacctctcctctgctaccccttcgaacgcctcaagatg
tcctccgacgacggggtcaggaggctcttcctggatttcactggaaaagagggtgaaatt
cagttggacctccactcgtgcccaaagcctatcgtcttcatcctccactcattcctctcg
gcaaagatcgccagactcggcctggtagcataa
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