Salvelinus namaycush (lake trout): 120048899
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Entry
120048899 CDS
T07522
Name
(RefSeq) PDZ and LIM domain protein 7-like
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120048899
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120048899
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120048899
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GFIT
Motif
Pfam:
PDZ
LIM
PDZ_6
partial_CstF
DUF4749
Motif
Other DBs
NCBI-GeneID:
120048899
NCBI-ProteinID:
XP_038851143
UniProt:
A0A8U0QW30
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Position
Sna5:complement(1271998..1376085)
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AA seq
475 aa
AA seq
DB search
MSGDHHNDKEAMSIYCITLNGPAPWGFRLQGGKDFSMPLTVSRLTPGGKAAQAGVGVGDW
VVSIGETNAEDMTHVEAQNKIRAAEESLTLTLSKAFHAGGDQKDSLAPASVQPKYSFAPS
AAINKMARPFTPGGGNTVIKPVAYAPKVNTPASAAPASMLQPHNGERKMGTLDACHTARL
RVLCDSRRVCIGRTPRAMEEKEDQPLYDHQNYQHEKHGLRVDGIPMFIPNDRSKKRLIED
TQDWQPRTGTTQSRSFRMLAQLTGTDYMQDPDDETMKRAREKFLTEIQSPRYARLRDWHH
ERSARALNIKSCIKASRSPAKAQTQTADKPDASKAPVNSGPKVRPPWVTDPGFADRYAPD
KTSTVLTQHRQPAQPTPMQNRSSILQAAQQAPEDSGRTPLCGACKKIIRGRYLVALGQSW
HPEEFQCSQCKVLLDEGGFFEERGSVFCTKCYDNRYAPNCAKCKKIIIGCLCIPG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgatcatcataatgacaaggaggccatgagtatatactgtataaccctcaac
ggtccagcaccatggggattcagacttcagggagggaaagacttcagcatgcccctcacg
gtgtccaggctgacccccgggggtaaggccgcccaggccggtgtgggcgtgggagattgg
gtggtgtccatcggagagaccaatgcagaagacatgacccatgtggaggcacagaacaag
atcagagcagcagaggagtctctcaccctcaccctcagcaaagctttccatgcgggtggc
gatcagaaggattcgctcgcccccgcctccgttcagcccaaatactccttcgcccccagc
gccgctatcaacaagatggcgcggccgttcacgccgggcggcggtaacacggtcattaaa
ccagtggcgtacgcccctaaagttaacaccccggcctcagcggcccccgccagcatgcta
cagccacacaacggtgagaggaagatggggactctggatgcctgtcacacagcccgcctg
cgagtcttgtgtgacagtcgccgagtctgcatcggcagaacgccccgtgctatggaggag
aaagaggatcagcctttgtatgaccaccagaattaccaacacgagaagcacggtctgcgg
gtggatggcatccccatgttcatccccaacgaccgcagcaagaagaggctgatcgaggac
actcaggattggcagccccgcacaggcaccacccagtcccgctccttccgcatgctggcc
cagctcacaggcaccgactacatgcaggacccagacgatgagacaatgaagagggccagg
gaaaagttccttacagagattcagagcccccgttacgcccgtctgagggactggcaccac
gaaaggtccgcacgggccctcaacatcaagtcctgcatcaaggcgtctcggtcacctgct
aaggcccagacccagacagccgacaaacctgacgcctctaaggctccagtcaactctggt
cctaaggtgcgtcctccgtgggtgactgacccaggtttcgctgaccgttacgccccagac
aagaccagtacggttctgacccagcacaggcagccggcccagcctacgcccatgcagaac
cgctcctctatcctacaggcagctcagcaggcacccgaggacagcggaaggacccctctc
tgtggagcctgcaaaaagatcattaggggccggtatctggtggcgcttggtcagtcctgg
cacccagaagagttccagtgttcccagtgtaaggtgttgttggatgagggaggattcttt
gaggagaggggctcagtcttctgcaccaagtgttatgataaccgctacgctcccaactgt
gccaaatgcaagaagattatcatagggtgtctctgtatcccaggctga
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