Salvelinus namaycush (lake trout): 120048994
Help
Entry
120048994 CDS
T07522
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase nu-like
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120048994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snh03400
]
120048994
Enzymes [BR:
snh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120048994
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
120048994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
TetR_C_6
Motif
Other DBs
NCBI-GeneID:
120048994
NCBI-ProteinID:
XP_038851182
UniProt:
A0A8U0QYY8
LinkDB
All DBs
Position
Sna6:19430336..19507661
Genome browser
AA seq
1108 aa
AA seq
DB search
MVLSFNVLCTRPWSRPQSYSQSSSSWDPSSQRDYSQTPALSQDSASSSTHKVRYPLALHT
PSNEPHWREDSTESPCVVGLVDQQGALHGDTAQSKEEIVTGGGPKENLSERDPIMRKRLF
ADMTTDNQRGMGGGEMEGRVERERKDDINKGGMKKKIERKNSRSSTKPYQQRKVSPSLGQ
MRDGEGQGVTERDSHPEERRKMDGPLAGVGGSRERGLSIDPALTKPSLAGHGRAAGLGSS
LTSIRASGEEESSGHHPLPSAQQPPLTPTFSIKSKHGAPLSKIALFRRPVKWEPPQSCQE
KARTLQGGQKWCKTQPPKHPALTPAFSLDPRAKTKTLHKTEGTKSVALTPNPPHRPPANS
VRPRQGVTMGERGLELTRDHSSSDTPQHRSSKTPKPPKLKRAKPGPNQGQLTPETEPEGG
SGAGDPQAQSNQSKTCLTTAMISDPRVRDAGKLSPEERGRVLEEAGQASALVLTMVYQDG
TTQMDPEQKLSPSVCGVLVMLKRDLDQTGPVPGPEEGVAQRDSLVYLRLEQKPAWAQSHQ
DHNLDLFNREMLLQVVSGSQLVVCYKAKDLLRTALQHYRPDLHWKQFSSCRVQDPQVAAW
LLDPADPSSCFTNLLTKHYRPVPXPPLLSLCQVSQVITSLSLLYRLNMELRSKLQSQGLW
ELYSNMELTMIPVLAAMESHRIHVDTESLKTTSEMLGTKMKQLEHEAHQAAGQMFLVSSS
TQLRTVLFEKLRLQERCENKKLPKTLNKQQQSTSEAVLLQLQDLHPLPKIILEYRQVHKI
KSTFVDGVLSCMMSKNFISSTWYQTSAVTGRISAKHPNFQALPRQPVQITKKQYVQGKEA
EVVTVHPRAMFIPQDGYTFLAADFCQVELRLLAHLSSDPELQRIFNNPQADVFTMLASQW
KGVSEGEVSSEDREHAKRIVYSVVYGAGRERLSGILGVSAEQASHFQDSFLHTYREVQTF
IHTTIQQCHKRGYVVSIMGRRRTLPHIHSTDWGVRMQAERQAVNFVVQGSAADLCKMAMI
RIFSQVSSSSSLSARLIAQLHDELLYEVEDSQVGEFAVLVKNTMESLQHIDCLGVHLKVP
LKVAVSSGKSWGSMSELHLPQTSLPPSS
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggtactatccttcaatgtgctgtgtaccaggccttggtccagaccccagtcctactcc
cagtcttcctcctcatgggacccttcatcccagagggactactctcagaccccagccctg
tcccaggactctgcctcctcttctacccacaaagtgaggtaccctctggccctccacacg
ccctcaaacgagcctcactggagagaggacagcacagaaagcccgtgtgtagttgggtta
gttgaccagcagggggctctgcatggagacacagcccagtcaaaggaggagatcgtgaca
ggaggaggaccaaaggagaacctcagcgagagagaccccattatgaggaaacgactcttc
gctgatatgactactgacaaccagagagggatggggggtggagagatggagggaagagtg
gagagggagagaaaggatgacatcaataaaggagggatgaagaaaaagattgagaggaag
aacagcaggagtagtaccaaaccctaccagcagaggaaggtgtcaccctcactagggcag
atgagggatggagagggccagggggtgacagagagggatagtcacccagaggagaggagg
aaaatggatgggccattggctggtgttggaggctccagagagagggggttgagtatagat
cctgcactaaccaaaccctctcttgctgggcatggaagggccgcagggctggggtccagc
ctgacctctatacgtgctagtggtgaggaggagagcagcggccatcaccctctcccctct
gcccaacaaccgcccctgacccctaccttctccatcaaaagtaaacacggcgcccctctg
tccaaaatcgccctcttcaggcggccggtgaaatgggaaccccctcaatcctgtcaggag
aaagcaaggaccttgcaagggggccagaagtggtgcaaaacccaacctcccaaacaccca
gctctgactccagcctttagccttgaccctcgagccaaaaccaagaccctccacaagact
gagggaaccaagagtgttgctctaacccctaaccccccacatcgacccccagccaactca
gttaggccaagacagggggtcacaatgggggagagggggcttgaattaaccagggaccat
tctagttcagacactccccagcatagatcctccaaaacccccaaaccacccaagctgaag
cgggccaaacctggccctaaccagggtcaactcaccccagaaactgaaccagagggggga
agcggtgccggtgacccccaggcccagtccaaccaatccaaaacctgtctgactacagcc
atgatctctgaccccagagtaagggatgctgggaagttgagtcctgaagagagaggcagg
gtgctggaggaggcagggcaggccagtgcgctggttctgaccatggtgtaccaggacgga
accactcagatggacccagaacagaagctcagtccgtcagtgtgtggggtgctggtgatg
ttgaaaagagatctggaccagactggaccagtaccaggaccagaggagggggtggcacaa
cgagacagcctggtctacctcagactggaacagaaacctgcatgggcccagagccaccaa
gaccacaacctagacctcttcaatagagagatgctgctgcaggtagtgtcagggtctcaa
ctggtggtgtgttacaaggccaaagacctgctccgtacagcactgcagcactacagacca
gacctacactggaaacaattctcatcttgtcgcgtccaggacccccaggtagcagcctgg
ctgttggacccagctgacccctcttcctgcttcaccaacctgcttaccaaacactaccgg
cccgtaccctaaccccccctcctctctctctgtcaggtgtcccaggttatcacgagtctg
tctctgctctacaggctgaatatggagctacgctctaaactacagagccagggtctgtgg
gagctgtactctaacatggagctgactatgatccctgtactggcagccatggagagccac
aggatccatgtggacacggagtccctaaagacaacatcagagatgctggggactaagatg
aagcagctagagcacgaggcccaccaggcagcaggccagatgtttctagtgtccagcagc
acccagctcaggacggttctgtttgagaagctgcgtctgcaggagcgctgtgaaaacaag
aagctccccaagactctcaacaaacaacagcagtctacatctgaggctgttttgttgcag
ctccaggacctgcaccccctgccgaagatcattctcgaatacagacaggttcataagatc
aagtccaccttcgtcgacggggttctgtcttgtatgatgagtaagaacttcatctcgtcc
acatggtaccagaccagtgcagtgactggaagaatctctgccaaacacccaaacttccag
gccctcccaaggcagccggtgcagatcactaagaagcaatatgttcaaggaaaggaagcg
gaggtggtgacggttcacccacgggccatgttcatcccccaggacggctacaccttcctg
gctgcagatttctgccaggtggaactgcgtctgctggctcacctctcgtcagaccctgag
ctgcagagaatcttcaacaacccacaggccgacgtcttcaccatgctggcctcacagtgg
aagggtgtgagtgaaggagaagtgagttcagaggatagagagcatgccaagcgtatcgtc
tactctgtggtgtatggagcaggtagggagcgtctgtcgggcatcctgggtgttagtgct
gaacaggccagccacttccaggacagcttcctccacacctacagagaggtccagaccttc
atacacaccaccatccagcagtgccacaaacgaggttacgtggtgtctattatgggccgg
cgaaggacacttcctcacatccactctacagactggggagtccgcatgcaggctgagaga
caggccgttaactttgtggtccaagggtcagctgctgacctgtgtaagatggccatgatc
cgtatcttctctcaagtctcctcctccagctctctctccgccaggctgatagctcagctc
catgacgagctgctctacgaggtggaggactctcaggtgggggagttcgcagtgttggtc
aagaacactatggagtccctgcaacacatcgattgtctgggagttcatctcaaagtcccc
ctgaaggtggcggtctcaagtggcaagtcctggggctccatgtccgaactacacctcccc
caaacatctctccccccctcttcctga
DBGET
integrated database retrieval system
