Salvelinus namaycush (lake trout): 120049032
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Entry
120049032 CDS
T07522
Symbol
rpgrip1
Name
(RefSeq) X-linked retinitis pigmentosa GTPase regulator-interacting protein 1
KO
K16550
protein fantom
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120049032 (rpgrip1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120049032 (rpgrip1)
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120049032 (rpgrip1)
Cilium and associated proteins [BR:
snh03037
]
Primary cilia and associated proteins
MKS complex
120049032 (rpgrip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPGR1_C
C2-C2_1
Motif
Other DBs
NCBI-GeneID:
120049032
NCBI-ProteinID:
XP_038851219
UniProt:
A0A8U0UGC7
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Position
Sna6:22389538..22398653
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AA seq
1001 aa
AA seq
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MEQEVLQYRQEVTSLQEKLDSVTKEFDMSVEDLSETLIQIKTFRLQQEGREGLRFLGIDA
KVEDSSRELRDLQASQAETVLELQKTRDLLLLQHRINNDLQLSSVLLPIPVLSQAELNTM
IERAEREREETKRRVAEKDKLLGRRALQINTLQAQLKELAYSPRNYKRNIPLQYTWPGGD
QEVVQPIEDDTTFSQLRAGESLLEIHLRGAAFTPGGLRTMGGARKGAGSKGEAVVTFCTY
ALLDFEMHSTPLVSGGQPNYGFTSKYPLSARDLGRLGGQGGGVLVELHQALGGVRFVTRG
GAQVPLVGAVERRGERVSGRVNIAGSEGDVIGILDFWMRLFPPAEPMDTLIERGTDRMTE
RGADRRIERGADRRIERGADRMTDRLMDRRAISPQRQWSPIWAQRGLGLEDSVREQELFD
YGGGIPNELEVVLEHCVGLRARWPELLPDSYLVYRLYDLPPHASPTIPCSANPLFNDTVS
YPLAVTTDVLEYLRGGSLWVYVFDDNDDQTPPAYLAKTPIPLRPLAAGRPIRGDYVLRDT
GGGPRGMVRVFIRWIYPFQPPEGSTQRHKEMDRMERAMERRSERAEELPRPIAKPRVKSK
AVEPRVDRPAAQKETSIQPKPRPPPIKLRLPQPDAQSERATPVTSPEPSVATPLQSPARK
RATPLRSPATLLLTPGTSQATPSQKQATPLRLPEVRGQSSPVSELTPSRPDSARSSRSSA
SDDKSYFKDIPSLEQVSMEEEEEDQEEKSDKAQVDSEVMESRESRTSNRSDVIIIPPSSR
RIRKGDKLRVEILSLSFEPTSRVALDESVQRVYVEYRLLGVPMETTETPMSLRKPSDGEE
IHYNFTRVIYVDSSEAAPLRQYLYSMLEGTDPNQGRLKFTVVNEPMDDDDDDDEECTDVG
HAFLDLQELLLTGNDITERQIDIVSVDVEKEVMGKLKVSLEAAKTLTGIYWDYRQKRDQE
TKKDEENDEKEEDKEEKETLKKEDEIQVIDYDIDDDDSDFY
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggaagttctacagtacagacaggaagtgacatcactgcaggagaaactggac
tcagtcacaaaggagtttgacatgagtgttgaggacctcagtgaaaccctgatacagatt
aagacatttaggctacagcaggagggccgtgagggtctgcggttcctagggattgatgcg
aaggtggaggactcatccagagagctgagggacctccaggcatcccaagcagagactgtg
ttagaattacagaagaccagagacttactgttactgcagcaccgcatcaataatgatttg
cagctctcctctgttctccttcctattcctgtcctgtcacaggctgagttgaacacaatg
atagagagagcagaaagagagagggaggagaccaagaggagggtagcggagaaagataaa
ctacttggaagaagagccttgcaaatcaacactttacaagctcagctgaaggagttagcc
tacagccctaggaactacaaacggaacataccactacagtacacctggccggggggggac
caggaagtggtacagcccattgaagacgacaccactttctctcaactacgagcgggggag
tcccttttggagatccacctcaggggggcagccttcacccctggggggctacggaccatg
gggggcgcccggaaaggggcggggtcaaaaggtgaagcggttgtgaccttttgcacctac
gccctcctggactttgaaatgcactccacacccctggtttcgggagggcaacccaactac
ggattcacatcgaagtaccccctctctgctcgtgatttggggaggctggggggtcagggg
ggaggggtgctggtggagctgcaccaggcattgggaggggtgcgtttcgtgacccgaggg
ggggcgcaggtgccactggttggagcggtagagaggagaggggagcgggtgagcggacga
gtcaacatcgcaggctctgagggagatgtcatagggatcctggacttttggatgcgtctc
ttccctcctgcggagcccatggacacactgatagagagaggaacggacagaatgacagag
agaggagcagacaggcggatagagagaggagcagacagacggatagagagaggagcagac
agaatgacagacagactgatggacagaagggccatcagtccacagagacagtggagcccc
atctgggcccagagaggtctaggcttggaggacagtgtgcgcgagcaggagctatttgac
tatggcggaggtatacccaatgagctggaggtggtgctagagcattgcgtgggtctaaga
gcccgctggccggaactacttccggactcctacctcgtgtaccgtctctacgacctgccg
cctcacgcttcccccacaataccgtgcagcgccaacccactgttcaacgacacggtcagc
taccctctggccgtgaccactgacgttctggagtacctaagagggggtagtctctgggtc
tatgtgttcgatgacaatgatgatcagactccacctgcttacctggccaagacacccata
ccactccgcccgctggcagcaggacgacctatcagaggtgactatgttctgagggacacg
ggtggcggtccgcgggggatggtccgcgtgttcatacgatggatttaccccttccaacca
ccagagggcagcacccaaagacacaaggagatggacaggatggagagagcgatggagagg
aggagcgagagagcagaggaactgccgaggcctattgccaagcctagggtgaagtcaaag
gctgttgagcccagagtggacagacctgctgcacaaaaagagaccagcattcagcccaag
ccccgtcctccaccaatcaagctgcgattaccccaacccgacgcccaatcagagcgagcc
acacctgtgacatccccggaacccagtgtcgccacacccctccagtctccagcgagaaaa
cgggccacgcctcttagatcacctgccacactccttctgacacctgggacgagtcaagcc
acaccctcccagaagcaggcgacccctctgaggctacctgaggtcagaggtcagagttcg
cctgtgtcagagttgaccccatctcgacctgactcagctcgttcctccaggagttccgcc
agcgatgataagagttattttaaggacatcccctcactggaacaggtgtctatggaagag
gaggaggaggaccaggaggaaaaaagtgacaaagcccaagtggatagtgaggtcatggaa
tccagagaatcaaggacctccaaccgtagtgatgtcatcattattcctccatcttcaagg
agaatcagaaagggagacaagttgagagtggagattctctctctctcttttgagcccacc
tcccgagtggctctcgatgagtcagtgcagcgcgtctatgtggagtaccgcctcctggga
gttcccatggaaaccacagagacacccatgtccctccgtaaaccatcggacggggaggag
atacattacaacttcacacgagtcatctatgtggacagctctgaggcagccccactaaga
cagtacctgtactccatgctggagggaactgacccaaaccagggcaggttgaagttcaca
gtggtcaacgagccaatggatgatgatgatgacgatgatgaggagtgtaccgacgttggc
cacgctttcctggacttacaggaactgctgctgacaggaaatgacatcaccgagcggcag
atcgacattgtcagtgtggatgtagagaaagaggtgatgggaaaactcaaagtctctctg
gaagcagcaaagactttgactgggatatactgggactatcgccagaagagagatcaagag
accaagaaggatgaagagaatgacgagaaggaggaagataaggaagagaaggaaacattg
aagaaagaagatgaaatacaagtgatagattatgacattgatgatgatgacagtgacttt
tactaa
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