Salvelinus namaycush (lake trout): 120049050
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Entry
120049050 CDS
T07522
Symbol
htr2cl1
Name
(RefSeq) 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1
KO
K04157
5-hydroxytryptamine receptor 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04020
Calcium signaling pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
snh04540
Gap junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120049050 (htr2cl1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120049050 (htr2cl1)
04082 Neuroactive ligand signaling
120049050 (htr2cl1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
120049050 (htr2cl1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
snh04030
]
120049050 (htr2cl1)
G protein-coupled receptors [BR:
snh04030
]
Rhodopsin family
Biogenic amine
Serotonin
120049050 (htr2cl1)
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Gene cluster
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Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_4
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
120049050
NCBI-ProteinID:
XP_038851236
UniProt:
A0A8U0UGS9
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Position
Sna6:complement(25036548..25064766)
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AA seq
576 aa
AA seq
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MGSPGGVALLSGFGSSATDSLEVGGWMVLPGGNNSTYLGLNQSLPWGVGAGGVDANLSLG
SSQTEAVIRAPTMKVIWLYLKEKNWPALLILVIIVLTVCGNILVILAVSLEKKLQNATNF
FLRSLAVADILVGILVMPISLINILYDYAWPLPSALCPIWIYLDVLFSTASIMHLCAISL
DRYVAIRNPIEHSRFNSRTKAMLKIAAVWTISIGVSMPIPVIGLHNKDKVFVDGSCVLNE
EHFMLIGSFVAFFIPLVIMVVSYYLTVQVLQRQATVFLYEGKTPSHQPLHPPPTPSNHRS
PTLNFQVPPINIEAPPPSRQGSLSCQKRAEHVRQTSLLNTSPSEYISIIPSSEVASQLSS
PTVHDPRDSIGRRGMMQAIKNERRASKVLGIVFFLFLIMWCPFFITNVTYVLCQGTCNEP
LLAELLNVFVWVGYISSGVNPLVYTLFNKTYRRAFSSYIRCQYNTGPNAGVSSKSLAVTT
VPCTSHAIVPIFGHNGGNGKMGSVDRNSNCRNGGGGGRVDGNGMIRGMEPDDPTDGRMGM
EMECPGIMSELKPGMSELKLSVGSFCHAQVERTSSV
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtccaggaggggtagccctactgagcgggttcggatcctccgccacggactct
ctggaggtagggggctggatggtcttgccaggggggaacaactccacctaccttggactc
aaccagagtctaccctggggagtcggggctggaggagtagacgctaacctgtcgttgggg
tcgtcgcagacagaggcggtgattcgagcaccgaccatgaaggttatttggttgtatttg
aaggagaagaactggccggcactcctcatcctggtcatcatcgtgctgacggtgtgtgga
aacatcctggtcatcctagctgtctcattggagaaaaagcttcagaatgccaccaacttc
ttcctgaggtctctggccgtggccgacattctggtggggatactagtgatgcctatatcc
ctcatcaacatactctatgactatgcgtggcccctgcccagtgcattgtgtcctatctgg
atctacctggatgttctcttctctacagccagtataatgcacttgtgtgctatatctctg
gatcgatacgtggccataagaaatcctatagagcacagccgtttcaactccagaactaaa
gctatgttgaagatagcagctgtgtggaccatatctataggagtgtcaatgcctatcccg
gtcatcggcctccataacaaggacaaggtgtttgttgacggaagctgtgtcctcaacgag
gagcacttcatgctgattggctcgttcgtggccttcttcatcccattggtcatcatggtg
gtgtcctactacctaaccgtacaggtcctccagcgccaggcaaccgtcttcctctacgag
gggaagactccctcccatcagccactacacccgccgcccactccctcaaaccaccgatcc
ccgaccctaaacttccaagtcccacccataaacattgaggctcctcctcctagcagacaa
gggagtctgagctgccagaaaagggcagagcatgtccggcagaccagcctcctaaacacc
tccccctcagagtacattagcataattccaagttccgaggtggcatcccagctgagctcg
ccgacggtgcatgatccacgggacagtatcgggagacgggggatgatgcaggccatcaag
aatgagaggcgggcctccaaggtgctggggattgtgttcttcctcttcctgatcatgtgg
tgtcctttcttcatcaccaatgtcacatacgtcctctgccagggtacatgcaatgagccg
ctattagccgagctcctcaacgtcttcgtatgggtgggatatatatcctccggagttaac
cctttagtgtataccttgtttaataagacatatagaagggcgttttccagctatatacgt
tgtcagtataacacagggccaaacgccggagttagtagtaagtcgcttgcagttacgacg
gtgccgtgtacgtcacatgccatcgtgcccatatttggacataatggtgggaatgggaag
atgggaagtgtggaccggaatagtaactgtcggaatggtggtggagggggtcgggtagat
gggaatgggatgatcagagggatggaacctgacgaccccacagatggcaggatggggatg
gagatggaatgtcccgggataatgtcggaattaaaacccggaatgtcggagctgaagctt
tccgtcggcagcttctgccacgcccaggtggagcgcaccagcagcgtctga
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