KEGG   Salvelinus namaycush (lake trout): 120049072
Entry
120049072         CDS       T07522                                 
Name
(RefSeq) laminin subunit beta-1-like
  KO
K05636  laminin, beta 1
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04510  Focal adhesion
snh04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120049072
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120049072
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C OVT1
Other DBs
NCBI-GeneID: 120049072
NCBI-ProteinID: XP_038851249
UniProt: A0A8U0UGD7
LinkDB
Position
Sna6:30978173..31008287
AA seq 1852 aa
MLVVREDDQNWATVESAKDIAQMMSAAVIMLCGEGTQSSTPMLKKTPGKRALAFYGNTCT
PAMTLSLRPSCDVTPEKPPGPTLGWRSFAQLPEFGDVCTEGSCYPATGDLLIGRAHKLTA
SSTCGIEKPERFCIVGHLEEEKKCFVCDSREKYDERMNHTTSHSIENLVTTFAPNRLKTW
WQSENGVENVTIQLNLEAEFHFTHLIMTFKTFRPATMVIERSMDFGKKWQVYRYYSYNCE
SAFPGISVGPMVKVDDIICDSRYSDIEPSAEGEVIFRVLDPAFEIEDPYSPRIQNMLKIT
NLRVQFTKLHTLGDNLLDSRDEVTEKYYYALFDMVVRGNCFCYGHASKCAPVDGIHVGTE
GMVHGHCMCNHNTEGLNCEHCKDFYNDLPWRPAEGRNTNACKMCECNYHSRSCHFDMAVY
LSTGNVSGGVCDECQHNTMGRQCEQCRPFYYQHPERHLRDPNICEPCSCDPTGSLQGGVC
DGRTDVSAGLIAGQCRCKTSVEGERCDHCRQGHYGLGQGPNGCLQCTCNPLGTLPGGSPC
DMDTGNCFCKRLVTARNCDRCLPQHWGLSNDMDGCRPCDCDQGGAVNNDCSPISGQCQCR
EHMYGRRCDQVESGFYFIALDHYTYEAEDAKHGPGVTVVPRPSPPNRSPTWTGAGFVKVP
EGAHLEFHINNLPDSMDYDMLIRYEPQLPEQWEQVEIRVIRPYSMRVEQPASPCENTLQG
GDQQLVSLPPGSRHVLLPRPVCLEKGWNYTVRLSLPLYSSLSDVQSPYTLIDSLVLIPRV
RELLLFEGSQGEGAWDTFQRYRCLESSQSVIKSPMTDICNNYIFSVSALLHQGAMACQCD
SQGSLSAVCDPSGGQCQCRPSVAGRNCDRCAPATFLFSPLGCRRCECSPTGSVNAFCHEA
TGQCECIPGASGRQCAHCLPGYWGFPQCQPCQCNGNSDYCHPQTGECQGCHAFTTGHMCE
RCLDGYHGDPVLGLGGHCRPCMCPDGPGSGRQYADSCYQTANNYQLVCVCSPGYRGARCD
ECAPGHYGNPQVPSGRCLPCQCNDNIDQLDPGSCDARTGVCLKCLHHTEGYGCQRCKLGY
YGNAASQSCRKCMCYSVGTTSETCPSPGECHCDLQTGQCPCRTNVIGQNCDSCAPDTFNI
GSGQGCQTCDCDPTHSFGTSCNELSGQCSCRSGFGGRKCNECRDKFWGDPEVKCQACDCD
LRGIASEQCHRSSGQCVCVEGVSGPRCNECARGYHGTFPACERCHQCFAEWDRVVGELSN
QTQRLKDHVTELQTSGVTAPYKDTVSSLEISANAISAIVENNPAIQKMEDVQQMMQQATE
LVAGLNERLNVSEDSLSRLVVNANDTEASLDALRKQAQELERTVTDIRDHIKTVKNSNIE
GAMDTITKAHLESKRAEIRANQSTSYPDNTLEQSATLRRQAEARLSQNQAEFDLRQQKHT
ERLERLATELNTLDLSELSKQTCGAAGGEEGCAASPCGGVGCVSEDGTLRCGGEGCDGLV
TQTQSTLKTAKDFDQEILSTVQEVDKLSRMVWEVNVRADEVKLSAQEVLLKSNQSRDRVE
ESNEQLRSLIKEIRDLLTNDRAKVEVIEAVSNEVLALEMPTSSEQLEALTKEIRDRVGTL
TSVEDILSQSANDIHTAERLLEQARTASQEVSEMKETAALVKEALETTEPAQNAAIDAVK
QAHNNTRGTLDLITSVESEMAESELRLSNATLRLLQLERDVTLLRESSLGTSHRTQHTER
LSETARQDAEQALQEFDLEVKGKYSVVEGLVVTKAEGVSDARKRAELLQQEAKELLTQTS
VKLQRLRELERSYAANQRTLEAKTVQLAGLEKTARQLLNDISQKVMVYSTCS
NT seq 5559 nt   +upstreamnt  +downstreamnt
atgttggtcgtcagggaggatgatcagaactgggccacagtggagtctgccaaggacata
gcccagatgatgagtgcagcggtgatcatgttgtgtggggagggtacccaaagtagcacg
ccaatgctcaagaagactcccgggaaaagagccttggctttctacggcaacacctgtacc
ccagccatgactctgtcgctaaggccaagctgtgatgtcacgcccgagaagcctccagga
cctaccctcgggtggcgctcctttgcccagctgccggagtttggggatgtgtgcactgag
gggagctgctaccccgccaccggggaccttctgatcggccgtgcgcacaagctcaccgcc
tcctccacctgcggcattgagaagcctgagcgcttttgcatcgttggtcacttggaggag
gagaagaagtgttttgtgtgtgactccagggagaagtatgatgagaggatgaaccacacc
accagccacagcatcgaaaacttggtcaccacctttgcccccaaccgcctcaagacctgg
tggcagtctgagaatggtgtggagaatgtgaccattcaactgaacctggaagctgagttc
cacttcacacatctcatcatgacctttaagacgttccgtccggctaccatggtgatcgag
cgttccatggattttgggaagaagtggcaggtgtaccgttactatagctataactgtgag
tccgccttccctgggatatccgtgggacccatggtcaaagtggacgacatcatctgtgac
tctcgctactctgacatagagccgtccgcagagggagaggtgatattcagggtgctggac
ccagcgtttgagattgaagacccttacagtcccaggatacagaacatgctgaagatcact
aacctgcgtgtccagttcactaagctccacacactgggtgacaacctgctggactccaga
gacgaggtcacggagaaatactactacgccctcttcgacatggtcgtccgcggcaactgc
ttctgctacggacatgcctccaaatgcgcccctgtcgatgggatacacgtaggcacagag
ggcatggtccatggtcactgtatgtgtaaccacaacacagagggtctgaactgtgagcac
tgtaaggacttctacaacgacctgccctggaggcctgcagagggacgcaacaccaatgcc
tgcaagatgtgcgagtgtaactaccactccaggtcatgtcactttgacatggctgtgtat
ctgtctacggggaacgtgagtggaggagtatgtgatgagtgtcaacataacaccatgggg
cgtcagtgtgagcagtgcagacccttctactaccagcaccccgaaagacacctgagagac
cccaacatctgtgaaccgtgtagctgtgacccgacgggctccctgcagggtggtgtgtgt
gacggcaggacagacgtgtctgctggtctaatagcaggacagtgtcgctgtaagaccagt
gtggagggagagcgctgcgaccactgtagacagggacactacggcctgggacagggacca
aacggctgcctgcagtgtacctgtaatcccctgggcacactgcctggaggaagcccatgt
gacatggacacaggaaactgcttctgcaaacgccttgtcaccgccaggaactgtgaccgg
tgtctgccgcaacactggggcctgagtaatgacatggacggctgcagaccatgtgactgc
gaccagggcggagccgtcaacaatgattgttctccgatatcaggccagtgtcagtgtcga
gaacacatgtatgggaggcgttgtgaccaggtggagtcaggattctacttcatcgccctg
gaccactacacctatgaggctgaggacgccaagcacggccctggtgtgacggtggttccc
aggccctctcctccgaaccgtagtcctacctggacaggggcggggtttgtcaaggtacct
gagggagcccacttggagttccacatcaacaacctacctgactccatggactacgacatg
ctgatccgctatgaaccacagttgccggagcagtgggagcaggtggagatcagagtgata
cgtccgtactcaatgagagtggaacagccagccagtccatgtgaaaacacgctacaagga
ggagatcagcagttagtgtctcttcctccaggatccagacatgtgctgctcccgaggcct
gtgtgtctggagaaggggtggaactacacggtgcgtctcagtctgcctctctactcctct
ctcagtgacgtccaaagcccctacacgctcatcgactccttggtgttgattccgcgggtg
cgtgagctactgttgtttgagggttctcagggcgagggggcgtgggatacgttccagagg
taccgctgtctggagagcagccagagcgtcatcaagagccccatgacggacatctgcaac
aactacatcttcagtgtgtctgccctgctacaccagggggctatggcgtgccagtgtgac
tcccagggctctctcagtgcagtgtgcgaccccagcggcgggcagtgccagtgtcggccc
agcgtggcaggcaggaactgtgaccgctgtgcccccgccaccttcctgttcagcccctta
ggatgcagacgctgtgagtgtagtcctacgggctctgtgaacgctttctgccacgaggcc
acaggtcagtgtgagtgtattccaggtgcgtcagggcgtcagtgtgcccactgcttgcca
ggctactggggcttccctcaatgccagccctgtcagtgcaatggcaacagcgactactgc
caccctcagactggggagtgccagggctgccacgccttcaccaccgggcacatgtgtgaa
aggtgtctggatggttaccatggcgacccagtgttgggtttggggggtcactgccgcccc
tgcatgtgtcccgacgggccggggagcgggcgccagtacgcagacagctgctaccagacc
gccaacaactaccagctggtctgtgtctgcagccctggatacagaggagccaggtgtgac
gagtgtgccccaggtcactatggtaacccccaggtgcccagcggccgctgtctgccctgc
cagtgtaacgacaacatcgaccagctggacccggggtcctgcgacgctcgcacaggcgtc
tgcctcaaatgcctgcaccataccgagggctatggctgccagcgctgcaagctgggttac
tacggcaatgccgccagccagagctgcaggaagtgtatgtgttattcagtgggcacaacg
tcggagacgtgtccgtccccgggggagtgtcactgtgacctgcagactggccagtgtccc
tgccggactaacgtgattggccagaactgcgacagctgtgcccctgatacgttcaacatt
ggaagcggacagggctgccagacctgtgactgtgacccaacccactcttttgggacgtcg
tgcaacgagctgtcagggcagtgctcgtgcaggtcaggtttcgggggaagaaaatgcaac
gagtgccgagataagttctggggagaccctgaggtcaaatgtcaagcgtgtgactgtgac
ctgcgtggcatcgccagcgagcagtgccaccgttcgtccggccagtgtgtgtgtgtggag
ggtgtgtctggaccccggtgtaacgagtgtgccagagggtaccatgggacgttccccgcc
tgcgaacgatgccaccagtgctttgccgagtgggaccgcgtggtaggggaactgtccaat
cagactcagcgtttgaaggatcatgtgacagagctccagaccagtggggtgacggcgccg
tacaaagacaccgttagcagtctggagattagtgctaatgctatcagtgcgatagtagag
aacaaccctgctatacagaagatggaagatgtacaacagatgatgcagcaggccactgag
ctggtggcaggcctgaacgagaggctgaacgtctcagaggattccctgtcccgtctcgtt
gtcaatgccaacgacaccgaggccagtctggacgcactgagaaagcaggcccaagagcta
gaaagaacagtcacagacattcgagaccacataaagactgtgaagaactctaacatagag
ggagcgatggacaccatcaccaaggcccacttggagtctaagagggcggagatccgtgcc
aatcagtccaccagttaccctgacaacactttggaacagtcggctacactacggcgccaa
gcggaggccagactgagccagaaccaggcggagtttgacctgagacaacagaaacacaca
gagagactggagaggctcgccacagagctcaacactcttgacctatcagagctcagcaag
cagacatgtggagcggctgggggggaggaggggtgtgctgcgtccccctgtggaggggtg
gggtgtgtgtcggaggacggcacccttcgctgtggtggggaggggtgtgacggtttggtc
acacagacacaaagcactctgaaaacagccaaggacttcgaccaggaaatcctctccacc
gtgcaggaagtggacaagctctccaggatggtgtgggaggtgaatgtgcgtgcggacgag
gtcaagctgagtgctcaagaggtgctgctgaagtccaaccagagccgagatagagtggaa
gagagcaacgagcagctccgcagcctcatcaaggagatacgagacctactcactaacgac
cgtgccaaagtggaggttattgaagcggtgtcaaatgaggtgttggccctggagatgcct
acatcgtccgagcagctggaggccctgaccaaggagatcagagacagggtgggaaccctc
accagcgtggaggacatcctcagtcagagcgccaacgacatacacactgcagagaggctg
ctggagcaggctcgcaccgccagtcaggaggtgtctgagatgaaggagacagctgccctg
gtgaaggaagctctggaaacgactgagcctgctcagaatgctgccatcgatgccgtcaaa
caggcccacaacaacaccaggggaacacttgacctcatcacatctgtggagtcggagatg
gcggagtcggagctgcgtctgagtaacgccacactgcgtctgctgcagctggagagagac
gtgactctgctgagagagagcagcctgggcaccagccaccgcacacagcacactgagaga
ctgtctgagaccgccaggcaggacgcggagcaggccctgcaggagtttgacttggaggtg
aagggtaaatacagtgttgtggagggcttggtggtgacgaaggcagagggcgtgtctgac
gccaggaagagggcagagctactgcagcaggaggccaaggagctgctcacccagaccagt
gttaaactacagagactcagagagttggagaggtcgtatgcggccaaccagcgtactctg
gaggccaagacagttcagctggccgggctggagaaaacagcacgccagctgctcaatgac
atcagccagaaagtaatggtctacagcacctgttcttag

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