Salvelinus namaycush (lake trout): 120049082
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Entry
120049082 CDS
T07522
Name
(RefSeq) protein bicaudal D homolog 1-like
KO
K18739
protein bicaudal D
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120049082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120049082
04131 Membrane trafficking [BR:
snh04131
]
120049082
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120049082
Membrane trafficking [BR:
snh04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
120049082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BicD
ApoO
DUF1759
Motif
Other DBs
NCBI-GeneID:
120049082
NCBI-ProteinID:
XP_038851256
UniProt:
A0A8U0QZ69
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All DBs
Position
Sna6:34594059..34623599
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AA seq
953 aa
AA seq
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MAAGGRCGETVEQCRAEVERLTRELAEANREKIRAAECGLVVLEENQTLKQQYSDLEAEQ
EGLRQELEQLQEAFGQTFSTQRKVAADGETNEENLLQESATKEAYYTSRLLGIQSELKQS
RAVTVNTQADNEHLSTLLQELRESNEMLELQRSRMREEIREYKFREARLLQDYTELEEEN
ITLQKLVSTLKQNQVEYEGLKHEIKVLEEETELLNSQLEDALRLKDISEAQLEEALDSLK
SEREQKKHLRKELVHHLSLCDVQYTGSAHLTFTSAPPSGTATPVSALSPNSEELGRCNGH
LHGGSGTGTGTGSLPRANGECRGAGRKGEGMVSDLFSEMNLTEIQKLKQQLLQVEREKTG
LLISLQECQTQLQHTQGALNEQHERALRLSERVTALRHLHREAHLAQEAQHDQEAHLNRE
ALMEQGEEEEEKEKGLIHSRGQAFCHQTPGLEILQCKYRVAVTEVVELKAELKSLRERYN
QCVEGGVEERTRGEAQHRSLEQQVGRLERSCREGREKVGGLETELRTAKNMASESQGALN
AAQDELVTFSEELAQLYHHVCLCNNETPNRVMLDYYRHGRGLRGISASLKGDDTRVLLTP
RLARRLAAVAAATSSSTAESRSPSESPSKERLSGEGGRDGGRDRDSPVPRTPPTGSPSIS
ASSSSSSSSSSPAVEPAGDLRREPMNIYNLNAIIREQVRHLQRAVDRSLQLSRQRAAARE
LAPLFDKDKEACMEEILKLKSLLSTKREQIATLRLVLKANKQTAENALANLKSKYENEKH
MVTDTMMKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNS
LLRMAIQQKLALTQRLEDLAFDQEQSHRTRGGKVARMKSSTPKSLIDRQKSAATVPPVSS
QLRWEKASQASRRSIVSAIREYRAHCPLSSYSSSPPRVPLLWLAQPPCPPGPL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggaggaagatgcggggagacggtggaacagtgccgggcagaggtggagcgt
ttgacccgtgagctggcggaggcgaaccgggagaagatccgggctgcggagtgcggtctg
gtggttctggaggagaaccagaccctgaagcagcaatattcggatctagaggccgagcaa
gaggggctccgacaggagctggagcagctacaagaggcgtttggccagaccttctccacc
cagcgcaaggtggctgcggacggggagaccaacgaggagaacctcttgcaggagtcagcc
actaaggaggcatactacacgagtcgcctgctggggatccagtcagagctcaaacagagc
cgggccgtcacagtcaacacgcaggccgacaacgaacacctcagtaccctgctgcaggag
ctcagagagagtaatgagatgttggagctgcagcggagccggatgagagaggagatcagg
gagtataagttcagagaggctcgactcctacaggactacactgagctggaggaggagaac
atcaccctgcagaaactagtgtccactctcaaacagaaccaggtggagtacgaggggtta
aagcatgagatcaaggttctggaggaggagaccgagctgctgaacagccagttagaagac
gccttacgtctcaaagacatctccgaggcccagctagaggaggccctggactccctgaag
agcgagcgggagcagaagaagcacctccgcaaggagctggtccaccacctcagcctgtgt
gacgtccaatacacgggcagcgcccacctcactttcacctcagctccacctagtggcacg
gctacgcctgtctccgccctgtcgcccaactcagaggagctgggcagatgtaacgggcat
ctacatggagggtcaggaactgggacggggactggatcgctgcccagggccaatggagag
tgtcggggagcggggaggaaaggagaggggatggtgtcggatctgttcagtgagatgaac
ctgacagagatacagaagctcaagcagcagctgctacaggtggagcgggagaaaacaggg
ctgttgatcagcctgcaagagtgtcagacgcagctgcagcatacacagggtgccctgaac
gagcagcacgagagggccctccgcctcagcgagagagtcaccgccctcaggcacctgcac
cgggaagcccatctcgcccaggaggcccagcacgaccaggaggcccacctcaatcgagag
gccctgatggagcagggagaagaggaagaggagaaagagaagggattaatacacagcagg
ggtcaggcattctgccaccagaccccgggtctggagatcctccagtgtaaatacagggtg
gctgtaaccgaggtggtcgagctaaaggctgagctgaagtcgctgagagagaggtacaac
cagtgtgtggagggcggggtggaggagaggacgcgcggagaggcccagcacagatctctg
gagcagcaggtggggaggctggagaggagctgccgggaaggtagggagaaggtggggggc
ctggagacggagctgagaacagccaagaacatggccagcgagagccagggggcgctcaac
gcagcacaggacgaactggtcaccttcagcgaggagctggctcaactttaccaccacgtc
tgcctctgtaacaacgagacgcccaaccgggtgatgctagactactacagacacggcaga
ggactaaggggtatcagtgcctcgctcaagggtgacgacacccgcgttctactcacgccc
cgccttgcccggcggctcgcagccgttgccgctgcaacctcgtcgtccacggcggagtct
cgcagcccctcggaatccccatccaaagagcggttgtcaggagagggaggccgggacggg
gggagggacagagacagtcctgtaccccgcacccctcctacgggctcccccagcatcagt
gcctcttcctcatcttcctcatcatcatcgtcgcctgcggtagagccagctggagacctg
cgtagggaacccatgaacatctataacctcaacgccatcatcagagagcaggtgaggcac
ctccagagggcagtggaccggtcactgcagctgtccagacagagggctgcagccagggaa
ctggccccactgtttgacaaggacaaagaggcctgtatggaggagatactgaagctcaag
tccctgctcagcaccaagagagaacagatcgctaccctcagactggtgctcaaagcgaac
aaacagactgcagagaatgccctggccaacctgaagagtaagtatgagaatgagaagcac
atggtgacagacaccatgatgaagctgaggaacgaactgaaggccctgaaggaggacgct
gccaccttctcatcgctcagagccatgttcgccaccaggtgtgacgagtatgtgactcag
ctggacgagatgcagaggcagctggctgcggcggaggacgagaagaagacgctcaactcc
ctcctgcggatggccatccagcagaaactagccctgacccagcgtctggaggacctagcc
ttcgaccaggagcagtcgcaccgcacccgcggcggcaaggtggcccgcatgaagagcagc
acccccaaatctctcatagatcgtcagaagtctgctgccacagtgccgccagtctcctca
cagctaaggtgggagaaggcctcccaagccagcagacgtagcattgtgtcggctatccgg
gagtaccgagctcactgccccctgagcagctacagcagcagtcctccacgagtgcctctc
ctttggctcgcccagccgccttgtccccctggtcctctataa
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